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A population protocol describes a set of state change rules for a population of $n$ indistinguishable finite-state agents (automata), undergoing random pairwise interactions. Within this very basic framework, it is possible to resolve a…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-19 Adrian Kosowski , Przemysław Uznański

Population protocols model information spreading and computation in network systems where pairwise node exchanges are determined by an external random scheduler and nodes have small memory. Most of the population protocols in the literature…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-06 Costas Busch , Dariusz R. Kowalski

We consider the problem of multi-choice majority voting in a network of $n$ agents where each agent initially selects a choice from a set of $K$ possible choices. The agents try to infer the choice in majority merely by performing local…

Multiagent Systems · Computer Science 2019-07-17 Hamidreza Bandealinaeini , Saber Salehkaleybar

We introduce a new coordination problem in distributed computing that we call the population stability problem. A system of agents each with limited memory and communication, as well as the ability to replicate and self-destruct, is…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-09 Shafi Goldwasser , Rafail Ostrovsky , Alessandra Scafuro , Adam Sealfon

There has recently been a surge of interest in the computational and complexity properties of the population model, which assumes $n$ anonymous, computationally-bounded nodes, interacting at random, and attempting to jointly compute global…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-01-12 Dan Alistarh , Martin Töpfer , Przemysław Uznański

Population protocols are a fundamental model in distributed computing, where many nodes with bounded memory and computational power have random pairwise interactions over time. This model has been studied in a rich body of literature aiming…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-05 Simina Branzei , Yuval Peres

The model of population protocols provides a universal platform to study distributed processes driven by pairwise interactions of anonymous agents. While population protocols present an elegant and robust model for randomized distributed…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-23 Adam Gańczorz , Leszek Gąsieniec , Tomasz Jurdziński , Jakub Kowalski , Grzegorz Stachowiak

New automated and high-throughput methods allow the manipulation and selection of numerous bacterial populations. In this manuscript we are interested in the neutral diversity patterns that emerge from such a setup in which many bacterial…

Populations and Evolution · Quantitative Biology 2024-03-13 Guilhem Doulcier , Amaury Lambert

A distributed computing system is a collection of processors that communicate either by reading and writing from a shared memory or by sending messages over some communication network. Most prior biologically inspired distributed computing…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-05-15 Sabrina Rashid , Gadi Taubenfeld , Ziv Bar-Joseph

Modelling, analysing and inferring triggering mechanisms in population reproduction is fundamental in many biological applications. It is also an active and growing research domain in mathematical biology. In this chapter, we review the…

Analysis of PDEs · Mathematics 2023-01-09 Marie Doumic , Marc Hoffmann

Population protocols are a model of distributed computation intended for the study of networks of independent computing agents with dynamic communication structure. Each agent has a finite number of states, and communication opportunities…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-09-02 Michael Raskin

We study population protocols, a model of distributed computing appropriate for modeling well-mixed chemical reaction networks and other physical systems where agents exchange information in pairwise interactions, but have no control over…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-01-24 David Doty , Mahsa Eftekhari , Leszek Gąsieniec , Eric Severson , Grzegorz Stachowiak , Przemysław Uznański

Molecular communication is an expanding body of research. Recent advances in biology have encouraged using genetically engineered bacteria as the main component in the molecular communication. This has stimulated a new line of research that…

Information Theory · Computer Science 2012-09-13 Arash Einolghozati , Mohsen Sardari , Faramarz Fekr

Population protocols are a model of distributed computing, in which $n$ agents with limited local state interact randomly, and cooperate to collectively compute global predicates. An extensive series of papers, across different communities,…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-07-17 Dan Alistarh , James Aspnes , Rati Gelashvili

For nearly two decades, population protocols have been extensively studied, yielding efficient solutions for central problems in distributed computing, including leader election, and majority computation, a predicate type in Presburger…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-17 Leszek Gąsieniec , Tytus Grodzicki , Tomasz Jurdziński , Jakub Kowalski , Grzegorz Stachowiak

For decades, researchers have been applying computer simulation to address problems in biology. However, many of these "grand challenges" in computational biology, such as simulating how proteins fold, remained unsolved due to their great…

Biological Physics · Physics 2009-01-08 Stefan M. Larson , Christopher D. Snow , Michael Shirts , Vijay S. Pande

The design of biological networks using bacteria as the basic elements of the network is initially motivated by a phenomenon called quorum sensing. Through quorum sensing, each bacterium performs sensing the medium and communicating it to…

Information Theory · Computer Science 2012-05-23 Arash Einolghozati , Mohsen Sardari , Faramarz Fekri

We consider the problem of counting the population size in the population model. In this model, we are given a distributed system of $n$ identical agents which interact in pairs with the goal to solve a common task. In each time step, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-29 Petra Berenbrink , Dominik Kaaser , Tomasz Radzik

We study the scalability of consensus-based distributed optimization algorithms by considering two questions: How many processors should we use for a given problem, and how often should they communicate when communication is not free?…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-09-06 Konstantinos I. Tsianos , Sean Lawlor , Michael G. Rabbat

The population protocol model describes collections of distributed agents that interact in pairs to solve a common task. We consider a dynamic variant of this prominent model, where we assume that an adversary may change the population size…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-09 Dominik Kaaser , Maximilian Lohmann
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