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This study develops a framework for quantification of the impact of changes in population mobility due to social distancing on the COVID-19 infection growth rate. Using the Susceptible-Infected-Recovered (SIR) epidemiological model we…

Populations and Evolution · Quantitative Biology 2020-06-05 Benjamin Seibold , Zivjena Vucetic , Slobodan Vucetic

We develop a statistical model for the testing of disease prevalence in a population. The model assumes a binary test result, positive or negative, but allows for biases in sample selection and both type I (false positive) and type II…

Applications · Statistics 2021-12-28 Lucas Böttcher , Maria R. D'Orsogna , Tom Chou

As the COVID-19 outbreak evolves, accurate forecasting continues to play an extremely important role in informing policy decisions. In this paper, we present our continuous curation of a large data repository containing COVID-19 information…

As the COVID-19 outbreak is developing the two most frequently reported statistics seem to be the raw confirmed case and case fatalities counts. Focusing on Italy, one of the hardest hit countries, we look at how these two values could be…

Applications · Statistics 2020-11-23 Krzysztof Bartoszek , Emanuele Guidotti , Stefano Maria Iacus , Marcin Okrój

The number of Covid-19 cases is increasing dramatically worldwide. Therefore, the availability of reliable forecasts for the number of cases in the coming days is of fundamental importance. We propose a simple statistical method for…

Background: Effective allocation of limited donor lungs in cystic fibrosis (CF) requires accurate survival predictions, so that high-risk patients may be prioritized for transplantation. In practice, decisions about allocation are made…

Applications · Statistics 2017-06-30 Aasthaa Bansal , Nicole Mayer-Hamblett , Christopher H. Goss , Patrick J. Heagerty

We develop a novel hybrid epidemiological model and a specific methodology for its calibration to distinguish and assess the impact of mobility restrictions (given by Apple's mobility trends data) from other complementary non-pharmaceutical…

Populations and Evolution · Quantitative Biology 2020-09-30 Victor Hugo Grisales Diaz , Oscar Andres Prado-Rubio , Mark J. Willis

When the novel coronavirus disease SARS-CoV2 (COVID-19) was officially declared a pandemic by the WHO in March 2020, the scientific community had already braced up in the effort of making sense of the fast-growing wealth of data gathered by…

Populations and Evolution · Quantitative Biology 2020-05-25 Timoteo Carletti , Duccio Fanelli , Francesco Piazza

The recent outbreak of the COVID-19 led to the death of millions of people worldwide. To stave off the spread of the virus, the authorities in the US employed different strategies, including the mask mandate order issued by the states'…

Machine Learning · Statistics 2021-11-09 Ali Lafzi , Miad Boodaghi , Siavash Zamani , Niyousha Mohammadshafie , Veeraraghava Raju Hasti

Governments across the world are currently facing the task of selecting suitable intervention strategies to cope with the effects of the COVID-19 pandemic. This is a highly challenging task, since harsh measures may result in economic…

Optimization and Control · Mathematics 2021-01-19 Andreas Kasis , Stelios Timotheou , Nima Monshizadeh , Marios Polycarpou

We demonstrate the ability of statistical data assimilation to identify the measurements required for accurate state and parameter estimation in an epidemiological model for the novel coronavirus disease COVID-19. Our context is an effort…

Populations and Evolution · Quantitative Biology 2020-08-04 Eve Armstrong , Manuela Runge , Jaline Gerardin

In the absence of pharmaceutical interventions to curb the spread of COVID-19, countries relied on a number of nonpharmaceutical interventions to fight the first wave of the pandemic. The most prevalent one has been stay-at-home orders,…

Applications · Statistics 2020-07-21 Kristi Bushman , Konstantinos Pelechrinis , Alexandros Labrinidis

Autoregressive (AR) models are useful tools in time series analysis. Inferences under such models are distorted in the presence of measurement error, which is very common in practice. In this article, we establish analytical results for…

Methodology · Statistics 2022-03-11 Qihuang Zhang , Grace Y. Yi

The analysis of complex longitudinal data such as COVID-19 deaths is challenging due to several inherent features: (i) Similarly-shaped profiles with different decay patterns; (ii) Unexplained variation among repeated measurements within…

Having accurate and timely data on confirmed active COVID-19 cases is challenging, since it depends on testing capacity and the availability of an appropriate infrastructure to perform tests and aggregate their results. In this paper, we…

The severe acute respiratory syndrome COVID-19 has been in the center of the ongoing global health crisis in 2020. The high prevalence of mild cases facilitates sub-notification outside hospital environments and the number of those who are…

Populations and Evolution · Quantitative Biology 2021-05-26 Gilberto Nakamura , Basil Grammaticos , Christophe Deroulers , Mathilde Badoual

Objective: To conduct a meta-analysis of current studies that examined sex differences in severity and mortality in patients with COVID-19, and identify potential mechanisms underpinning these differences. Methods: We performed a systematic…

Populations and Evolution · Quantitative Biology 2020-03-31 Xiyi Wei , Yu-Tian Xiao , Jian Wang , Rui Chen , Wei Zhang , Yue Yang , Daojun Lv , Chao Qin , Di Gu , Bo Zhang , Weidong Chen , Jianquan Hou , Ninghong Song , Guohua Zeng , Shancheng Ren

Authors Yi-Cheng Chen, Ping-En Lu, Cheng-Shang Chang, and Tzu-Hsuan Liu use the Finite Impulse Response (FIR) linear system filtering method to track and predict the number of people infected and recovered from COVID-19, in a pandemic…

Machine Learning · Statistics 2025-06-30 Felipe Rogério Pimentel , Rafael Gustavo Alves

The evolution of the COVID-19 epidemic has been accompanied by accumulating evidence on the underlying epidemiological parameters. Hence there is potential for models providing mid-term forecasts of the epidemic trajectory using such…

Applications · Statistics 2020-11-10 Peter Congdon

The US COVID-19 Forecast Hub, a repository of COVID-19 forecasts from over 50 independent research groups, is used by the Centers for Disease Control and Prevention (CDC) for their official COVID-19 communications. As such, the Forecast Hub…

Applications · Statistics 2025-02-20 Saad Mohammad Abrar , Naman Awasthi , Daniel Smolyak , Vanessa Frias-Martinez