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Repetitive DNA (repeats) poses significant challenges for accurate and efficient genome assembly and sequence alignment. This is particularly true for metagenomic data, where genome dynamics such as horizontal gene transfer, gene…

Machine Learning · Computer Science 2024-02-15 Ali Azizpour , Advait Balaji , Todd J. Treangen , Santiago Segarra

Spectral graph convolutional neural networks (GCNNs) have been producing encouraging results in graph classification tasks. However, most spectral GCNNs utilize fixed graphs when aggregating node features, while omitting edge feature…

Computer Vision and Pattern Recognition · Computer Science 2022-10-06 Yang Yi , Xuequan Lu , Shang Gao , Antonio Robles-Kelly , Yuejie Zhang

Graph neural networks (GNN) have been ubiquitous in graph node classification tasks. Most of GNN methods update the node embedding iteratively by aggregating its neighbors' information. However, they often suffer from negative disturbance,…

Machine Learning · Computer Science 2022-02-02 Jie Chen , Shouzhen Chen , Mingyuan Bai , Jian Pu , Junping Zhang , Junbin Gao

Many few-shot learning approaches have been designed under the meta-learning framework, which learns from a variety of learning tasks and generalizes to new tasks. These meta-learning approaches achieve the expected performance in the…

Machine Learning · Computer Science 2022-01-05 Yongchun Zhu , Fuzhen Zhuang , Xiangliang Zhang , Zhiyuan Qi , Zhiping Shi , Juan Cao , Qing He

Few-shot learning (FSL), purposing to resolve the problem of data-scarce, has attracted considerable attention in recent years. A popular FSL framework contains two phases: (i) the pre-train phase employs the base data to train a CNN-based…

Computer Vision and Pattern Recognition · Computer Science 2024-03-20 Rui Xu , Lei Xing , Shuai Shao , Lifei Zhao , Baodi Liu , Weifeng Liu , Yicong Zhou

Graph Neural Networks (GNNs) and their message passing framework that leverages both structural and feature information, have become a standard method for solving graph-based machine learning problems. However, these approaches still…

Machine Learning · Computer Science 2024-11-20 Simon Delarue , Thomas Bonald , Tiphaine Viard

Few-shot image classification aims to classify unseen classes with limited labelled samples. Recent works benefit from the meta-learning process with episodic tasks and can fast adapt to class from training to testing. Due to the limited…

Computer Vision and Pattern Recognition · Computer Science 2021-02-24 Da Chen , Yuefeng Chen , Yuhong Li , Feng Mao , Yuan He , Hui Xue

We propose a graph semi-supervised learning framework for classification tasks on data manifolds. Motivated by the manifold hypothesis, we model data as points sampled from a low-dimensional manifold $\mathcal{M} \subset \mathbb{R}^F$. The…

Machine Learning · Computer Science 2025-11-03 Caio F. Deberaldini Netto , Zhiyang Wang , Luana Ruiz

Node classifiers are required to comprehensively reduce prediction errors, training resources, and inference latency in the industry. However, most graph neural networks (GNN) concentrate only on one or two of them. The compromised aspects…

Machine Learning · Computer Science 2023-06-01 Yi Luo , Guangchun Luo , Ke Qin , Aiguo Chen

Graphs are complex objects that do not lend themselves easily to typical learning tasks. Recently, a range of approaches based on graph kernels or graph neural networks have been developed for graph classification and for representation…

Machine Learning · Computer Science 2022-05-19 Chen Cai , Yusu Wang

Meta-learning has emerged as a prominent technology for few-shot text classification and has achieved promising performance. However, existing methods often encounter difficulties in drawing accurate class prototypes from support set…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Xinyue Liu , Yunlong Gao , Linlin Zong , Bo Xu

Few-shot learning aims to adapt knowledge learned from previous tasks to novel tasks with only a limited amount of labeled data. Research literature on few-shot learning exhibits great diversity, while different algorithms often excel at…

Computer Vision and Pattern Recognition · Computer Science 2021-09-14 Chi Zhang , Henghui Ding , Guosheng Lin , Ruibo Li , Changhu Wang , Chunhua Shen

With the tremendous expansion of graphs data, node classification shows its great importance in many real-world applications. Existing graph neural network based methods mainly focus on classifying unlabeled nodes within fixed classes with…

Artificial Intelligence · Computer Science 2022-06-06 Bin Lu , Xiaoying Gan , Lina Yang , Weinan Zhang , Luoyi Fu , Xinbing Wang

Graph neural networks (GNNs) is widely used to learn a powerful representation of graph-structured data. Recent work demonstrates that transferring knowledge from self-supervised tasks to downstream tasks could further improve graph…

Machine Learning · Computer Science 2021-07-21 Xueting Han , Zhenhuan Huang , Bang An , Jing Bai

Graph neural networks have been demonstrated as a powerful paradigm for effectively learning graph-structured data on the web and mining content from it.Current leading graph models require a large number of labeled samples for training,…

Machine Learning · Computer Science 2025-02-21 Yonghao Liu , Mengyu Li , Fausto Giunchiglia , Lan Huang , Ximing Li , Xiaoyue Feng , Renchu Guan

Graph neural networks (GNNs) have been applied into a variety of graph tasks. Most existing work of GNNs is based on the assumption that the given graph data is optimal, while it is inevitable that there exists missing or incomplete edges…

Machine Learning · Computer Science 2022-05-13 Qianggang Ding , Deheng Ye , Tingyang Xu , Peilin Zhao

The ability to incrementally learn new classes is vital to all real-world artificial intelligence systems. A large portion of high-impact applications like social media, recommendation systems, E-commerce platforms, etc. can be represented…

Machine Learning · Computer Science 2021-12-28 Zhen Tan , Kaize Ding , Ruocheng Guo , Huan Liu

Graph Convolutional Network (GCN) is a model that can effectively handle graph data tasks and has been successfully applied. However, for large-scale graph datasets, GCN still faces the challenge of high computational overhead, especially…

Machine Learning · Computer Science 2026-04-15 Guan Wang , Shuyin Xia , Lei Qian , Tao Wu , Guoyin Wang , Yi Wang , Wei Wang

Molecular property is usually observed with a limited number of samples, and researchers have considered property prediction as a few-shot problem. One important fact that has been ignored by prior works is that each molecule can be…

Machine Learning · Computer Science 2023-06-30 Xiang Zhuang , Qiang Zhang , Bin Wu , Keyan Ding , Yin Fang , Huajun Chen

Graph Neural Networks (GNNs) have demonstrated remarkable proficiency in handling a range of graph analytical tasks across various domains, such as e-commerce and social networks. Despite their versatility, GNNs face significant challenges…

Machine Learning · Computer Science 2025-01-08 Zhe-Rui Yang , Jindong Han , Chang-Dong Wang , Hao Liu