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Biomedical named entity recognition (NER) and entity linking (EL) strongly depend on annotated corpora, but the utility of these resources for benchmarking is often assumed rather than characterized. We present a corpus-centric framework…

Computation and Language · Computer Science 2026-05-21 Robert Leaman , Rezarta Islamaj , Zhiyong Lu

We propose a unified neural network architecture and learning algorithm that can be applied to various natural language processing tasks including: part-of-speech tagging, chunking, named entity recognition, and semantic role labeling. This…

Machine Learning · Computer Science 2011-03-03 Ronan Collobert , Jason Weston , Leon Bottou , Michael Karlen , Koray Kavukcuoglu , Pavel Kuksa

Biomedical Named Entity Recognition presents significant challenges due to the complexity of biomedical terminology and inconsistencies in annotation across datasets. This paper introduces SRU-NER (Slot-based Recurrent Unit NER), a novel…

Computation and Language · Computer Science 2025-07-25 João Ruano , Gonçalo M. Correia , Leonor Barreiros , Afonso Mendes

We propose a new model for unsupervised document embedding. Leading existing approaches either require complex inference or use recurrent neural networks (RNN) that are difficult to parallelize. We take a different route and develop a…

Computation and Language · Computer Science 2018-02-21 Chundi Liu , Shunan Zhao , Maksims Volkovs

Automated annotation of clinical text with standardized medical concepts is critical for enabling structured data extraction and decision support. SNOMED CT provides a rich ontology for labeling clinical entities, but manual annotation is…

Computation and Language · Computer Science 2025-08-05 Ali Noori , Pratik Devkota , Somya Mohanty , Prashanti Manda

In recent years, the growing ubiquity of Internet memes on social media platforms, such as Facebook, Instagram, and Twitter, has become a topic of immense interest. However, the classification and recognition of memes is much more…

Computation and Language · Computer Science 2020-07-29 Li Yuan , Jin Wang , Xuejie Zhang

Nested Named Entity Recognition (NNER) focuses on addressing overlapped entity recognition. Compared to Flat Named Entity Recognition (FNER), annotated resources are scarce in the corpus for NNER. Data augmentation is an effective approach…

Computation and Language · Computer Science 2024-06-19 Xingming Liao , Nankai Lin , Haowen Li , Lianglun Cheng , Zhuowei Wang , Chong Chen

In medical information extraction, medical Named Entity Recognition (NER) is indispensable, playing a crucial role in developing medical knowledge graphs, enhancing medical question-answering systems, and analyzing electronic medical…

Computation and Language · Computer Science 2024-03-26 Xiaojing Du , Hanjie Zhao , Danyan Xing , Yuxiang Jia , Hongying Zan

When extracting information from handwritten documents, text transcription and named entity recognition are usually faced as separate subsequent tasks. This has the disadvantage that errors in the first module affect heavily the performance…

Computer Vision and Pattern Recognition · Computer Science 2018-03-23 Manuel Carbonell , Mauricio Villegas , Alicia Fornés , Josep Lladós

Most of the Natural Language Processing systems are involved in entity-based processing for several tasks like Information Extraction, Question-Answering, Text-Summarization and so on. A new challenge comes when entities play roles…

Computation and Language · Computer Science 2025-11-11 Neelesh Kumar Shukla , Sanasam Ranbir Singh

Recognizing entities in texts is a central need in many information-seeking scenarios, and indeed, Named Entity Recognition (NER) is arguably one of the most successful examples of a widely adopted NLP task and corresponding NLP technology.…

Computation and Language · Computer Science 2023-10-24 Uri Katz , Matan Vetzler , Amir DN Cohen , Yoav Goldberg

We present a simple approach to improve biomedical named entity recognition (NER) by injecting categorical labels and Part-of-speech (POS) information into the model. We use two approaches, in the first approach, we first train a…

Computation and Language · Computer Science 2023-11-07 Sumam Francis , Marie-Francine Moens

While typical named entity recognition (NER) models require the training set to be annotated with all target types, each available datasets may only cover a part of them. Instead of relying on fully-typed NER datasets, many efforts have…

Machine Learning · Computer Science 2020-05-04 Shi Zhi , Liyuan Liu , Yu Zhang , Shiyin Wang , Qi Li , Chao Zhang , Jiawei Han

Extracting structured intelligence via Named Entity Recognition (NER) is critical for cybersecurity, but the proliferation of datasets with incompatible annotation schemas hinders the development of comprehensive models. While combining…

Cryptography and Security · Computer Science 2025-10-31 Yasir Ech-Chammakhy , Anas Motii , Anass Rabii , Oussama Azrara , Jaafar Chbili

This paper proposes a novel framework for detecting redundancy in supervised sentence categorisation. Unlike traditional singleton neural network, our model incorporates character-aware convolutional neural network (Char-CNN) with…

Computation and Language · Computer Science 2017-06-06 Xinyu Fu , Eugene Ch'ng , Uwe Aickelin , Simon See

Few-shot named entity recognition (NER) systems recognize entities using a few labeled training examples. The general pipeline consists of a span detector to identify entity spans in text and an entity-type classifier to assign types to…

Computation and Language · Computer Science 2024-06-21 Chang Tian , Wenpeng Yin , Dan Li , Marie-Francine Moens

Named-entity recognition (NER) detects texts with predefined semantic labels and is an essential building block for natural language processing (NLP). Notably, recent NER research focuses on utilizing massive extra data, including…

Computation and Language · Computer Science 2023-05-09 Yuxiang Zhang , Junjie Wang , Xinyu Zhu , Tetsuya Sakai , Hayato Yamana

Named Entity Recognition (NER) is a key component in industrial information extraction pipelines, where systems must satisfy strict latency and throughput constraints in addition to strong accuracy. State-of-the-art NER accuracy is often…

Computation and Language · Computer Science 2026-04-23 Andrea Maracani , Savas Ozkan , Junyi Zhu , Sinan Mutlu , Mete Ozay

Named entity recognition (NER) is a widely applicable natural language processing task and building block of question answering, topic modeling, information retrieval, etc. In the medical domain, NER plays a crucial role by extracting…

Computation and Language · Computer Science 2020-11-13 Veysel Kocaman , David Talby

Named entity recognition (NER) is widely used in natural language processing applications and downstream tasks. However, most NER tools target flat annotation from popular datasets, eschewing the semantic information available in nested…

Computation and Language · Computer Science 2019-06-05 Nicky Ringland , Xiang Dai , Ben Hachey , Sarvnaz Karimi , Cecile Paris , James R. Curran
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