English
Related papers

Related papers: On bucket increasing trees, clustered increasing t…

200 papers

We introduce the notion of doubly rooted plane trees and give a decomposition of these trees, called the butterfly decomposition which turns out to have many applications. From the butterfly decomposition we obtain a one-to-one…

Combinatorics · Mathematics 2007-05-23 William Y. C. Chen , Nelson Y. Li , Louis W. Shapiro

Phylogenetic trees (i.e. evolutionary trees, additive trees or X-trees) play a key role in the processes of modeling and representing species evolution. Genome evolution of a given group of species is usually modeled by a species…

Populations and Evolution · Quantitative Biology 2023-01-03 Vladimir Makarenkov , Gayane S. Barseghyan , Nadia Tahiri

Certain families of combinatorial objects admit recursive descriptions in terms of generating trees: each node of the tree corresponds to an object, and the branch leading to the node encodes the choices made in the construction of the…

We introduce a random recursive tree model with two communities, called balanced community modulated random recursive tree, or BCMRT in short. In this setting, pairs of nodes of different type appear sequentially. Each node of the pair…

Statistics Theory · Mathematics 2024-02-12 Anna Ben-Hamou , Vasiliki Velona

We first show that increasing trees are in bijection with set compositions, extending simultaneously a recent result on trees due to Tonks and a classical result on increasing binary trees. We then consider algebraic structures on the…

Combinatorics · Mathematics 2007-05-23 Frederic Patras , Manfred Schocker

We consider a Bernoulli bond percolation on a random recursive tree of size $n\gg 1$, with supercritical parameter $p_n=1-c/\ln n$ for some $c>0$ fixed. It is known that with high probability, there exists then a unique giant cluster of…

Probability · Mathematics 2013-05-22 Jean Bertoin

We develop further Cannon's method of cone types for finding the growth function of a group, which can also be used to find the coordination sequences of certain infinite graphs. We then apply this method to compute the growth functions and…

Group Theory · Mathematics 2020-12-29 Rostislav Grigorchuk , Cosmas Kravaris

Most generative models for clustering implicitly assume that the number of data points in each cluster grows linearly with the total number of data points. Finite mixture models, Dirichlet process mixture models, and Pitman--Yor process…

Methodology · Statistics 2015-12-03 Jeffrey Miller , Brenda Betancourt , Abbas Zaidi , Hanna Wallach , Rebecca C. Steorts

We study two generalizations of the gamma-expansion of Eulerian polynomials from the viewpoint of the decompositions of statistics. We first present an expansion formula of the trivariate Eulerian polynomials, which are the enumerators for…

Combinatorics · Mathematics 2021-11-18 Shi-Mei Ma , Jun Ma , Jean Yeh , Yeong-Nan Yeh

In this article we study decreasing and increasing factorisations of the cycle, which are decompositions of the cycle $(1~2\dots n)$ into a product of $n-1$ transpositions satisfying monotonicity conditions. We explicit a bijection between…

Probability · Mathematics 2022-04-21 Etienne Bellin

Analysis of probability distributions conditional on species trees has demonstrated the existence of anomalous ranked gene trees (ARGTs), ranked gene trees that are more probable than the ranked gene tree that accords with the ranked…

Populations and Evolution · Quantitative Biology 2014-07-14 Filippo Disanto , Noah A. Rosenberg

We give a number of results about families of Ulam sets. Generalizing behavior of Ulam sets U(1,n), we prove using an novel model theoretic approach that there is a rigidity phenomenon for Ulam sets U(a,b) as b increases. Based on this, we…

Number Theory · Mathematics 2017-11-02 Joshua Hinman , Borys Kuca , Alexander Schlesinger , Arseniy Sheydvasser

For a natural class of $r \times n$ integer matrices, we construct a non-convex polytope which periodically tiles $\mathbb R^n$. From this tiling, we provide a family of geometrically meaningful maps from a generalized sandpile group to a…

Combinatorics · Mathematics 2022-03-30 Alex McDonough

We consider the model of random trees introduced by Devroye (1999), the so-called random split trees. The model encompasses many important randomized algorithms and data structures. We then perform supercritical Bernoulli bond-percolation…

Probability · Mathematics 2021-06-01 Gabriel Berzunza , Cecilia Holmgren

Gradient boosted decision trees are a popular machine learning technique, in part because of their ability to give good accuracy with small models. We describe two extensions to the standard tree boosting algorithm designed to increase this…

Machine Learning · Statistics 2017-11-01 Natalia Ponomareva , Thomas Colthurst , Gilbert Hendry , Salem Haykal , Soroush Radpour

We consider a probability distribution on the set of Boolean functions in n variables which is induced by random Boolean expressions. Such an expression is a random rooted plane tree where the internal vertices are labelled with connectives…

Combinatorics · Mathematics 2015-09-28 Antoine Genitrini , Bernhard Gittenberger , Veronika Kraus , Cécile Mailler

Starting from certain causality conditions and a discrete form of general covariance, we derive a very general family of classically stochastic, sequential growth dynamics for causal sets. The resulting theories provide a relatively…

General Relativity and Quantum Cosmology · Physics 2011-05-05 D. P. Rideout , R. D. Sorkin

We study numerically a model of nonequilibrium networks where nodes and links are added at each time step with aging of nodes and connectivity- and age-dependent attachment of links. By varying the effects of age in the attachment…

Statistical Mechanics · Physics 2015-05-13 Nuno Crokidakis , Marcio Argollo de Menezes

This article studies the sequence of iterative degrees of a birational map of the plane. This sequence is known either to be bounded or to have a linear, quadratic or exponential growth. The classification elements of infinite order with a…

Algebraic Geometry · Mathematics 2015-09-02 Jérémy Blanc , Julie Déserti

We study a process termed "agglomerative percolation" (AP) in two dimensions. Instead of adding sites or bonds at random, in AP randomly chosen clusters are linked to all their neighbors. As a result the growth process involves a diverging…

Statistical Mechanics · Physics 2015-03-17 Claire Christensen , Golnoosh Bizhani , Seung-Woo Son , Maya Paczuski , Peter Grassberger