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Nuclear magnetic resonance (NMR) spectroscopy is a powerful method for the investigation of three-dimensional structures of biological molecules such as proteins. Determining a protein structure is essential for understanding its function…

Artificial Intelligence · Computer Science 2015-06-22 John Emmons , Steven Johnson , Timothy Urness , Adina Kilpatrick

In polycrystalline materials, grain boundaries are sites of enhanced atomic motion, but the complexity of the atomic structures within a grain boundary network makes it difficult to link the structure and atomic dynamics. Here we use a…

We present a Mathematica program package MagneticTB, which can generate the tight-binding model for arbitrary magnetic space group. The only input parameters in MagneticTB are the (magnetic) space group number and the orbital information in…

Materials Science · Physics 2022-01-25 Zeying Zhang , Zhi-Ming Yu , Gui-Bin Liu , Yugui Yao

The GOR program for predicting protein secondary structure is extended to include triple correlation. A score system for a residue pair to be at certain conformation state is derived from the conditional weight matrix describing amino acid…

Biological Physics · Physics 2007-05-23 Xin Liu , Li-mei Zhang , Wei-Mou Zheng

The ability to design complex neural network architectures which enable effective training by stochastic gradient descent has been the key for many achievements in the field of deep learning. However, developing such architectures remains a…

Neural and Evolutionary Computing · Computer Science 2019-07-04 Marcus Märtens , Dario Izzo

Genetic algorithms, computer programs that simulate natural evolution, are increasingly applied across many disciplines. They have been used to solve various optimisation problems from neural network architecture search to strategic games,…

Neural and Evolutionary Computing · Computer Science 2021-09-14 Aymeric Vie , Alissa M. Kleinnijenhuis , Doyne J. Farmer

We examine the feasibility of predicting and subsequently managing the future evolution of a Complex Adaptive System. Our archetypal system mimics a competitive population of mechanical, biological, informational or human objects. We show…

Disordered Systems and Neural Networks · Physics 2007-05-23 David M. D. Smith , Neil F. Johnson

Graph neural networks (GNNs) have emerged as powerful tools to accurately predict materials and molecular properties in computational discovery pipelines. In this article, we exploit the invertible nature of these neural networks to…

Machine Learning · Computer Science 2024-06-06 Félix Therrien , Edward H. Sargent , Oleksandr Voznyy

Plenty of scientific and real-world applications are built on magnetic fields and their characteristics. To retrieve the valuable magnetic field information in high resolution, extensive field measurements are required, which are either…

Machine Learning · Computer Science 2023-03-22 Stefan Pollok , Nataniel Olden-Jørgensen , Peter Stanley Jørgensen , Rasmus Bjørk

Statistical learning algorithms are finding more and more applications in science and technology. Atomic-scale modeling is no exception, with machine learning becoming commonplace as a tool to predict energy, forces and properties of…

Chemical Physics · Physics 2020-12-09 Félix Musil , Michele Ceriotti

Personalized medicine is expected to maximize the intended drug effects and minimize side effects by treating patients based on their genetic profiles. Thus, it is important to generate drugs based on the genetic profiles of diseases,…

Machine Learning · Computer Science 2021-12-17 Sejin Park , Hyunju Lee

Mesons play a crucial role in understanding the strong interaction in the framework of quantum chromodynamics (QCD). However, the mass and decay width of several ordinary and exotic mesons remain experimentally undetermined. In this work,…

High Energy Physics - Phenomenology · Physics 2025-10-16 S. Rostami , M. Malekhosseini , M. Rahavi Ezabadi , K. Azizi

The potential to utilize metal-organic frameworks as a replacement for rare earth materials as well as in technological applications has prompted increased interested in this material class. The simulation of organic materials, including…

Materials Science · Physics 2026-05-01 Alexander C. Tyner , Avinash Pathapati , Alexander V. Balatsky

Multi-model inference covers a wide range of modern statistical applications such as variable selection, model confidence set, model averaging and variable importance. The performance of multi-model inference depends on the availability of…

Statistics Theory · Mathematics 2019-06-07 Ching-Wei Cheng , Guang Cheng

An artificial intelligence tool is exploited to discover and characterize a new molybdenum-base alloy that is the most likely to simultaneously satisfy targets of cost, phase stability, precipitate content, yield stress, and hardness.…

Materials Science · Physics 2018-03-05 B. D. Conduit , N. G. Jones , H. J. Stone , G. J. Conduit

mRNA technology has revolutionized vaccine development, protein replacement therapies, and cancer immunotherapies, offering rapid production and precise control over sequence and efficacy. However, the inherent instability of mRNA poses…

Biomolecules · Quantitative Biology 2025-03-26 Max Ward , Mary Richardson , Mihir Metkar

In this paper, it is presented a novel strategy to optimize the determination of magnetic couplings by using ab-initio calculations of the energy. This approach allows determining efficiently, in terms of a proposed effective magnetic spin…

Strongly Correlated Electrons · Physics 2020-09-04 J. M. Matera , C. A. Lamas , L. A. Errico , A. V. Gil Rebaza , V. I. Fernández

Investigating the solar magnetic field is crucial to understand the physical processes in the solar interior as well as their effects on the interplanetary environment. We introduce a novel method to predict the evolution of the solar…

Bayesian belief networks can be used to represent and to reason about complex systems with uncertain, incomplete and conflicting information. Belief networks are graphs encoding and quantifying probabilistic dependence and conditional…

Artificial Intelligence · Computer Science 2013-03-08 Carlos Rojas-Guzman , Mark A. Kramer

Motivated by a desire to improve on the current state of the art in genetic programming, and aided by recent progress in understanding the computational aspects of evolutionary systems, we describe a process that creates a set of generic…

Neural and Evolutionary Computing · Computer Science 2019-02-19 David Landaeta
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