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Flexible fibers at the microscopic scale, such as flagella and cilia, play essential roles in biological and synthetic systems. The dynamics of these slender filaments in viscous flows involve intricate interactions between their mechanical…

Analysis of PDEs · Mathematics 2025-02-17 Clément Moreau , François Alouges , Aline Lefebvre-Lepot , Jessie Levillain

The processing of thin-structured materials in a fluidic environment, from nearly inextensible but flexible graphene sheets to highly extensible polymer films, arises in many applications. So far, little is known about the dynamics of such…

Soft Condensed Matter · Physics 2022-02-15 Yijiang Yu , Michael D. Graham

The fragmentation of small, brittle, flexible, inextensible fibers is investigated in a fully-developed, homogeneous, isotropic turbulent flow. Such small fibers spend most of their time fully stretched and their dynamics follows that of…

Soft Condensed Matter · Physics 2019-12-17 Sofía Allende , Christophe Henry , Jérémie Bec

We develop a numerical framework to simulate the locomotion of a flagellated bacterium with a spheroidal head (such as Escherichia coli) in biological fluids like mucus, which are entangled polymer solutions exhibiting elasto-viscoplastic…

Fluid Dynamics · Physics 2026-04-01 Arjun Sharma , Sabarish V. Narayanan , Sarah Hormozi , Donald L. Koch

Locomotion in Stokes flow is an intensively-studied problem because it describes important biological phenomena such as the motility of many species' sperm, bacteria, algae and protozoa. Numerical computations can be challenging,…

Fluid Dynamics · Physics 2018-05-15 Meurig T. Gallagher , David J. Smith

We present a novel platform for the large-scale simulation of fibrous structures immersed in a Stokesian fluid and evolving under confinement or in free-space. One of the main motivations for this work is to study the dynamics of fiber…

Numerical Analysis · Mathematics 2017-01-04 Ehssan Nazockdast , Abtin Rahimian , Denis Zorin , Michael Shelley

Viscoelastic surface rheology plays an important role in multiphase systems. A typical example is the actin cortex which surrounds most animal cells. It shows elastic properties for short time scales and behaves viscous for longer time…

Fluid Dynamics · Physics 2021-06-01 Eloy de Kinkelder , Leonard Sagis , Sebastian Aland

The method of regularized stokeslets is extensively used in biological fluid dynamics due to its conceptual simplicity and meshlessness. This simplicity carries a degree of cost in computational expense and accuracy because the number of…

Fluid Dynamics · Physics 2018-02-14 David J. Smith

This paper presents a numerical method for the simulation of fluid-structure interaction specifically tailored to interactions between Newtonian fluids and a large number of slender viscoelastic Cosserat rods. Because of their high…

Soft Condensed Matter · Physics 2022-01-13 S. Tschisgale , J. Fröhlich

We describe a numerical method to simulate an elastic shell immersed in a viscous incompressible fluid. The method is developed as an extension of the immersed boundary method using shell equations based on the Kirchhoff-Love and the planar…

Numerical Analysis · Mathematics 2025-10-20 E. Givelberg

In this fluid dynamics video we explore an array of different possible dynamics for a flexible filament sedimenting in a viscous fluid. The time-dependent shapes and trajectories of the filament are determined analytically and numerically…

Fluid Dynamics · Physics 2013-10-03 Harishankar Manikantan , Lei Li , David Saintillan , Saverio E. Spagnolie

We simulate the nonlocal Stokesian hydrodynamics of an elastic filament which is active due a permanent distribution of stresslets along its contour. A bending instability of an initially straight filament spontaneously breaks flow symmetry…

We consider numerical algorithms for the simulation of the rheology of two-dimensional vesicles suspended in a viscous Stokesian fluid. The vesicle evolution dynamics is governed by hydrodynamic and elastic forces. The elastic forces are…

Numerical Analysis · Mathematics 2015-06-17 Bryan Quaife , George Biros

This work presents a novel numerical investigation of the dynamics of free-boundary flows of viscoelastic liquid membranes. The governing equation describes the balance of linear momentum, in which the stresses include the viscoelastic…

Fluid Dynamics · Physics 2022-04-12 Valeria Barra , Shawn A. Chester , Shahriar Afkhami

Elastic confinements play an important role in many soft matter systems and affect the transport properties of suspended particles in viscous flow. On the basis of low-Reynolds-number hydrodynamics, we present an analytical theory of the…

Fluid Dynamics · Physics 2019-04-12 Abdallah Daddi-Moussa-Ider , Badr Kaoui , Hartmut Löwen

Motivated by the motion of biopolymers and membranes in solution, this article presents a formulation of the equations of motion for curves and surfaces in a viscous fluid. We focus on geometrical aspects and simple variational methods for…

Soft Condensed Matter · Physics 2010-05-26 Thomas R. Powers

A linear stability analysis of an elastic surface immersed in a viscous fluid is presented. The coupled system is modeled using the method of regularized Stokeslets (MRS), a Lagrangian method for simulating fluid-structure interaction at…

Fluid Dynamics · Physics 2025-07-10 Dana Ferranti , Sarah D. Olson

Microorganisms such as algae and bacteria move in a viscous environment with extremely low Reynolds ($Re$), where the viscous drag dominates the inertial forces. They have adapted to this environment by developing specialized features such…

Robotics · Computer Science 2024-12-10 Nnamdi Chikere , Yasemin Ozkan-Aydin

A boundary element implementation of the regularised Stokeslet method of Cortez is applied to cilia and flagella-driven flows in biology. Previously-published approaches implicitly combine the force discretisation and the numerical…

Fluid Dynamics · Physics 2010-08-04 David J. Smith

Cilia and flagella are self-actuated microtubule-based structures that are present on many cell surfaces, ranging from the outer surface of single-cell organisms to the internal epithelial surfaces in larger animals. A fast and robust…

Fluid Dynamics · Physics 2020-04-08 Hanliang Guo , Hai Zhu , Shravan Veerapaneni