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Microbial communities play important roles in the function and maintenance of various biosystems, ranging from human body to the environment. Current methods for analysis of microbial communities are typically based on taxonomic…

Genomics · Quantitative Biology 2015-12-02 Ehsaneddin Asgari , Kiavash Garakani , Mohammad R. K Mofrad

Community structure is pervasive in various real-world networks, portraying the strong local clustering of nodes. Unveiling the community structure of a network is deemed to a crucial step towards understanding the dynamics on the network.…

Physics and Society · Physics 2024-10-30 Weihua Zhan , Lei Deng , Jihong Guan , Jun Niu

This paper proposes a frequent pattern data mining algorithm based on support vector machine (SVM), aiming to solve the performance bottleneck of traditional frequent pattern mining algorithms in high-dimensional and sparse data…

Machine Learning · Computer Science 2024-12-23 Pochun Li

Community detection is the task of discovering groups of nodes sharing similar patterns within a network. With recent advancements in deep learning, methods utilizing graph representation learning and deep clustering have shown great…

Social and Information Networks · Computer Science 2022-11-14 E. Dmitriev , M. W. Chekol , S. Wang

Large, open datasets can accelerate ecological research, particularly by enabling researchers to develop new insights by reusing datasets from multiple sources. However, to find the most suitable datasets to combine and integrate,…

Digital Libraries · Computer Science 2025-10-07 Zehao Lu , Thijs L van der Plas , Parinaz Rashidi , W Daniel Kissling , Ioannis N Athanasiadis

Joint Spatial Division and Multiplexing (JSDM) is a recently proposed scheme to enable massive MIMO like gains and simplified system operations for Frequency Division Duplexing (FDD) systems. The key idea lies in partitioning the users into…

Information Theory · Computer Science 2013-06-03 Ansuman Adhikary , Giuseppe Caire

Understanding the assembly of ecosystems to estimate the number of species at different spatial scales is a challenging problem. Until now, maximum entropy approaches have lacked the important feature of considering space in an explicit…

Populations and Evolution · Quantitative Biology 2014-07-10 Matteo Adorisio , Jacopo Grilli , Samir Suweis , Sandro Azaele , Jayanth R. Banavar , Amos Maritan

Massive MIMO systems are well-suited for mm-Wave communications, as large arrays can be built with reasonable form factors, and the high array gains enable reasonable coverage even for outdoor communications. One of the main obstacles for…

Multilayer networks are a useful data structure for simultaneously capturing multiple types of relationships between a set of nodes. In such networks, each relational definition gives rise to a layer. While each layer provides its own set…

Social and Information Networks · Computer Science 2016-10-21 Natalie Stanley , Saray Shai , Dane Taylor , Peter J. Mucha

This paper describes a cascading multimodal pipeline for high-resolution biodiversity mapping across Europe, integrating species distribution modeling, biodiversity indicators, and habitat classification. The proposed pipeline first…

Artificial Intelligence · Computer Science 2025-04-08 César Leblanc , Lukas Picek , Benjamin Deneu , Pierre Bonnet , Maximilien Servajean , Rémi Palard , Alexis Joly

Data mining algorithms are originally designed by assuming the data is available at one centralized site.These algorithms also assume that the whole data is fit into main memory while running the algorithm. But in today's scenario the data…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-12-03 Aruna Govada , Bhavul Gauri , S. K. Sahay

This study introduces a novel methodology for mapping scientific communities at scale, addressing challenges associated with network analysis in large bibliometric datasets. By leveraging enriched publication metadata from the French…

Digital Libraries · Computer Science 2025-01-20 Victor Barbier , Eric Jeangirard

We used a metacommunity of 49 discrete communities of aquatic invertebrates to analyze the dynamical relationship between community and metacommunity species distributions as a test of the neutral theory of biodiversity and biogeography. At…

Populations and Evolution · Quantitative Biology 2007-05-23 Michael M. Fuller , Tamara N. Romanuk , Jurek Kolasa

Accelerating global biodiversity loss has highlighted the role of complex relationships and shared patterns among species in determining their responses to environmental changes. The structure of an ecological community, represented by…

Applications · Statistics 2025-09-03 Braden Scherting , Otso Ovaskainen , David B. Dunson

This work intends to lay the foundations for identifying the prevailing forest types and the delineation of forest units within private forest inventories in the Autonomous Province of Trento (PAT), using currently available remote sensing…

Computer Vision and Pattern Recognition · Computer Science 2023-01-10 Daniele Michelini , Michele Dalponte , Angelo Carriero , Erico Kutchart , Salvatore Eugenio Pappalardo , Massimo De Marchi , Francesco Pirotti

Adaptation to local environments often occurs through natural selection acting on a large number of loci, each having a weak phenotypic effect. One way to detect these loci is to identify genetic polymorphisms that exhibit high correlation…

Populations and Evolution · Quantitative Biology 2015-03-20 Eric Frichot , Sean Schoville , Guillaume Bouchard , Olivier François

Recent years have witnessed Spiking Neural Networks (SNNs) gaining attention for their ultra-low energy consumption and high biological plausibility compared with traditional Artificial Neural Networks (ANNs). Despite their distinguished…

Neural and Evolutionary Computing · Computer Science 2024-08-30 Jiahang Cao , Hanzhong Guo , Ziqing Wang , Deming Zhou , Hao Cheng , Qiang Zhang , Renjing Xu

Connectivity estimation is challenging in the context of high-dimensional data. A useful preprocessing step is to group variables into clusters, however, it is not always clear how to do so from the perspective of connectivity estimation.…

Machine Learning · Statistics 2018-05-25 Ricardo Pio Monti , Aapo Hyvärinen

It is common in the study of networks to investigate meso-scale features to try to gain an understanding of network structure and function. For example, numerous algorithms have been developed to try to identify "communities," which are…

Social and Information Networks · Computer Science 2015-06-19 Lucas G. S. Jeub , Prakash Balachandran , Mason A. Porter , Peter J. Mucha , Michael W. Mahoney

Biogeographical regions (geographically distinct assemblages of species and communities) constitute a cornerstone for ecology, biogeography, evolution and conservation biology. Species turnover measures are often used to quantify…

Quantitative Methods · Quantitative Biology 2015-08-19 Daril A. Vilhena , Alexandre Antonelli
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