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Neuroscientists classify neurons into different types that perform similar computations at different locations in the visual field. Traditional methods for neural system identification do not capitalize on this separation of 'what' and…

Machine Learning · Statistics 2018-01-30 David A. Klindt , Alexander S. Ecker , Thomas Euler , Matthias Bethge

Gamma frequency oscillations (25-140 Hz), observed in the neural activities within many brain regions, have long been regarded as a physiological basis underlying many brain functions, such as memory and attention. Among numerous…

Neurons and Cognition · Quantitative Biology 2021-01-26 Yuhang Cai , Tianyi Wu , Louis Tao , Zhuo-Cheng Xiao

Neuroscientists fit morphologically and biophysically detailed neuron simulations to physiological data, often using evolutionary algorithms. However, such gradient-free approaches are computationally expensive, making convergence slow when…

Neurons and Cognition · Quantitative Biology 2024-07-23 Ilenna Simone Jones , Konrad Paul Kording

The human brain is a complex system defined by multi-way, higher-order interactions invisible to traditional pairwise network models. Although a diverse array of analytical methods has been developed to address this shortcoming, the field…

Quantitative Methods · Quantitative Biology 2025-11-11 Mohamma Reza Salehi , Ali BashirGonbadi , Hamid Soltanian-Zadeh

Recurrent neural networks (RNNs) are widely used throughout neuroscience as models of local neural activity. Many properties of single RNNs are well characterized theoretically, but experimental neuroscience has moved in the direction of…

Machine Learning · Computer Science 2023-01-31 Leo Kozachkov , Michaela Ennis , Jean-Jacques Slotine

Image instance retrieval is the problem of retrieving images from a database which contain the same object. Convolutional Neural Network (CNN) based descriptors are becoming the dominant approach for generating {\it global image…

Computer Vision and Pattern Recognition · Computer Science 2017-01-19 Vijay Chandrasekhar , Jie Lin , Qianli Liao , Olivier Morère , Antoine Veillard , Lingyu Duan , Tomaso Poggio

The human brains are organized into hierarchically modular networks facilitating efficient and stable information processing and supporting diverse cognitive processes during the course of development. While the remarkable reconfiguration…

Neurons and Cognition · Quantitative Biology 2020-09-16 Xuyun Wen , Liming Hsu , Weili Lin , Han Zhang , Dinggang Shen

The analysis of variance (ANOVA) decomposition offers a systematic method to understand the interaction effects that contribute to a specific decision output. In this paper we introduce Neural-ANOVA, an approach to decompose neural networks…

Machine Learning · Statistics 2025-08-01 Steffen Limmer , Steffen Udluft , Clemens Otte

Ever since the last two decades of the past century pioneering studies in the field of statistical physics had focused their efforts on developing models of neural networks that could display memory storage and retrieval. Though many…

Disordered Systems and Neural Networks · Physics 2023-05-16 Enrico Ventura

Countless learning tasks require dealing with sequential data. Image captioning, speech synthesis, and music generation all require that a model produce outputs that are sequences. In other domains, such as time series prediction, video…

Machine Learning · Computer Science 2015-10-20 Zachary C. Lipton , John Berkowitz , Charles Elkan

Recurrent Neural Networks (RNNs) are widely used for modelling neural activity, yet the mathematical interplay of core procedures is used to analyze them (temporal rescaling, discretization, and linearization) remain uncharacterized. This…

Neural and Evolutionary Computing · Computer Science 2025-04-08 Mariano Caruso , Cecilia Jarne

Neural-network models of high-level brain functions such as memory recall and reasoning often rely on the presence of stochasticity. The majority of these models assumes that each neuron in the functional network is equipped with its own…

Neurons and Cognition · Quantitative Biology 2022-05-17 Jakob Jordan , Mihai A. Petrovici , Oliver Breitwieser , Johannes Schemmel , Karlheinz Meier , Markus Diesmann , Tom Tetzlaff

This paper presents a comprehensive and quality collection of functional human brain network data for potential research in the intersection of neuroscience, machine learning, and graph analytics. Anatomical and functional MRI images have…

Recent work has demonstrated that large-scale, multi-animal models are powerful tools for characterizing the relationship between neural activity and behavior. Current large-scale approaches, however, focus exclusively on either predicting…

Searching for the $k$-nearest neighbors (KNN) in multimodal data retrieval is computationally expensive, particularly due to the inherent difficulty in comparing similarity measures across different modalities. Recent advances in multimodal…

Machine Learning · Computer Science 2025-08-25 Chengyu Gong , Gefei Shen , Luanzheng Guo , Nathan Tallent , Dongfang Zhao

Task-trained recurrent neural networks (RNNs) are widely used in neuroscience and machine learning to model dynamical computations. To gain mechanistic insight into how neural systems solve tasks, prior work often reverse-engineers…

Machine Learning · Computer Science 2026-02-11 Ann Huang , Satpreet H. Singh , Flavio Martinelli , Kanaka Rajan

Deep neural networks are increasingly being used in cognitive modeling as a means of deriving representations for complex stimuli such as images. While the predictive power of these networks is high, it is often not clear whether they also…

Neurons and Cognition · Quantitative Biology 2020-06-01 Aditi Jha , Joshua Peterson , Thomas L. Griffiths

Biological neural networks are notoriously hard to model due to their stochastic behavior and high dimensionality. We tackle this problem by constructing a dynamical model of both the expectations and covariances of the fractions of active…

Neurons and Cognition · Quantitative Biology 2025-02-25 Vincent Painchaud , Patrick Desrosiers , Nicolas Doyon

Decoding behavior, perception, or cognitive state directly from neural signals has applications in brain-computer interface research as well as implications for systems neuroscience. In the last decade, deep learning has become the…

Neurons and Cognition · Quantitative Biology 2020-05-21 Jesse A. Livezey , Joshua I. Glaser

Decoding approaches are widely used in neuroscience and machine learning to compare stimulus representations across neural systems, such as different brain regions, organisms, and deep learning models. Popular methods include decoding…

Neurons and Cognition · Quantitative Biology 2026-05-08 Johannes Bertram , Luciano Dyballa , T. Anderson Keller , Savik Kinger , Steven W. Zucker