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SARS-CoV-2 is a severe respiratory infection that infects humans. Its outburst entitled it as a pandemic emergence. To get a grip on this, outbreak specific preventive and therapeutic interventions are urgently needed. It must be said that,…

Quantitative Methods · Quantitative Biology 2020-05-07 Giulia Russo , Marzio Pennisi , Marco Viceconti , Francesco Pappalardo

Since the outbreak of Coronavirus Disease 2019 (COVID-19), most of the impacted patients have been diagnosed with high fever, dry cough, and soar throat leading to severe pneumonia. Hence, to date, the diagnosis of COVID-19 from lung…

Image and Video Processing · Electrical Eng. & Systems 2021-12-28 Abbas Raza Ali , Marcin Budka

The wide spread of coronavirus disease 2019 (COVID-19) has declared a global health emergency. As one of the most important targets for antibody and drug developments, Spike RBD-ACE2 interface has received extensive attention. Here, using…

Biomolecules · Quantitative Biology 2021-05-14 Yanmei Yang , Yunju Zhang , Yuanyuan Qu , Xuewei Liu , Mingwen Zhao , Yuguang Mu , Weifeng Li

To predict if developing human embryos are permissive to coronaviruses, we analyzed publicly available single cell RNA-seq datasets of zygotes, 4-cell, 8-cell, morula, inner cell mass, epiblast, primitive endoderm and trophectoderm for the…

The rapid outbreaks of lethal viruses necessitate the development of novel antiviral substance. Besides the conventional antiviral substances, biocompatible nanomaterials also have significant potential in combating the virus at various…

Materials Science · Physics 2021-01-01 Joydip Sengupta , Chaudhery Mustansar Hussain

Coronavirus Disease 2019 (COVID-19) has become a serious global epidemic in the past few months and caused huge loss to human society worldwide. For such a large-scale epidemic, early detection and isolation of potential virus carriers is…

Computer Vision and Pattern Recognition · Computer Science 2020-04-16 Zheng Jiang , Menghan Hu , Lei Fan , Yaling Pan , Wei Tang , Guangtao Zhai , Yong Lu

Preliminary epidemiologic, phylogenetic and clinical findings suggest that several novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants have increased transmissibility and decreased efficacy of several existing…

Coronavirus disease (COVID-19) is an infectious disease caused by a newly discovered coronavirus. It is similar to influenza viruses and raises concerns through alarming levels of spread and severity resulting in an ongoing pandemic…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-01 Adarsh Kumar , Kriti Sharma , Harvinder Singh , Sagar Gupta Naugriya , Sukhpal Singh Gill , Rajkumar Buyya

The emergence of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) disease (COVID-19) has posed a serious threat to global health. As no specific therapeutics are yet available to control disease evolution, more in-depth…

Coronavirus or COVID-19, which has been declared pandemic by the World Health Organization, has incurred huge losses to the lives of people throughout the world. Although, the scientists, researchers and doctors are working round the clock…

Social and Information Networks · Computer Science 2020-12-15 Shibli Nisar , Syed Muhammad Ali Zuhaib , Abasin Ulasyar , Muhammad Tariq

Broadly neutralizing antibodies (bNAbs) are promising targets for vaccination and therapy against HIV. Passive infusions of bNAbs have shown promise in clinical trials as a potential alternative for anti-retroviral therapy. A key challenge…

Populations and Evolution · Quantitative Biology 2021-12-02 Colin LaMont , Jakub Otwinowski , Kanika Vanshylla , Henning Gruell , Florian Klein , Armita Nourmohammad

Alisporivir is a cyclophilin inhibitor with demonstrated in vitro and in vivo activity against hepatitis C 11 virus (HCV). We estimated antiviral effectiveness of alisporivir alone or in combination with 12 pegylated-Inteferon (peg-IFN) in…

Quantitative Methods · Quantitative Biology 2015-09-18 Thi Huyen Tram Nguyen , France Mentré , Micha Levi , Jing Yu , Jérémie Guedj

The identification of protein-ligand interaction plays a key role in biochemical research and drug discovery. Although deep learning has recently shown great promise in discovering new drugs, there remains a gap between deep learning-based…

Molecular Networks · Quantitative Biology 2021-08-10 Fan Hu , Lei Wang , Yishen Hu , Dongqi Wang , Weijie Wang , Jianbing Jiang , Nan Li , Peng Yin

Drug repurposing (or repositioning) is the process of finding new therapeutic uses for drugs already approved by drug regulatory authorities (e.g., the Food and Drug Administration (FDA) and Therapeutic Goods Administration (TGA)) for other…

Artificial Intelligence · Computer Science 2023-06-27 Chaarvi Bansal , Rohitash Chandra , Vinti Agarwal , P. R. Deepa

Novel coronavirus (COVID-19) outbreak, has raised a calamitous situation all over the world and has become one of the most acute and severe ailments in the past hundred years. The prevalence rate of COVID-19 is rapidly rising every day…

Image and Video Processing · Electrical Eng. & Systems 2022-09-09 Md. Milon Islam , Fakhri Karray , Reda Alhajj , Jia Zeng

The influenza/H1N1 virus has caused hazard in the public health of many countries. Hence, existing influenza drugs could not cope with H1N1 infection due to the high mutation rate of the virus. In this respect, new method to block the virus…

Other Quantitative Biology · Quantitative Biology 2016-09-07 Arli Aditya Parikesit , Harry Noviardi , Djati Kerami , Usman Sumo Friend Tambunan

Objective: Total 186 biologically important phenylpropanoids and polyketides compounds from different Indian medicinal plants and dietary sources were screened to filter potential compounds that bind at the active site of the therapeutic…

Biomolecules · Quantitative Biology 2020-05-26 Seshu Vardhan , Bharat Z. Dholakiya , Suban K Sahoo

COVID-19 remains a challenging global threat with ongoing waves of infections and clinical disease which have resulted millions of deaths and an enormous strain on health systems worldwide. Effective vaccines have been developed for the…

We are presenting COVID-19Base, a knowledgebase highlighting the biomedical entities related to COVID-19 disease based on literature mining. To develop COVID-19Base, we mine the information from publicly available scientific literature and…

Research on kinase-targeting drugs has made great strides over the last 30 years and is attracting greater attention for the treatment of yet more kinase-related diseases. Currently, 42 kinase drugs have been approved by the FDA, most of…

Molecular Networks · Quantitative Biology 2018-11-27 Zheng Zhao , Philip E. Bourne