English
Related papers

Related papers: Chirality-induced bacterial rheotaxis in bulk shea…

200 papers

The behavior of flagellated bacteria swimming in non-Newtonian media remains an area with contradictory and conflicting results. We report on the behavior of wild-type and smooth-swimming E. coli in Newtonian, shear thinning and…

Biological Physics · Physics 2020-07-15 Zijie Qu , Kenneth S. Breuer

Biological microswimmers are known to navigate upstream of an external flow (positive rheotaxis) in trajectories ranging from linear, spiral to oscillatory. Such rheotaxis stems from the interplay between the motion and complex shapes of…

Soft Condensed Matter · Physics 2022-05-27 Ranabir Dey , Carola M. Buness , Babak Vajdi Hokmabad , Chenyu Jin , Corinna C. Maass

The dynamics of a quasi two-dimensional isotropic droplet in a cholesteric liquid crystal medium under symmetric shear flow is studied by lattice Boltzmann simulations. We consider a geometry in which the flow direction is along the axis of…

Soft Condensed Matter · Physics 2018-07-13 Federico Fadda , Giuseppe Gonnella , Antonio Lamura , Enzo Orlandini , Adriano Tiribocchi

The dynamics of red blood cells (RBCs) in simple shear flow was studied using a theoretical approach based on three variables: a shape parameter, the inclination angle $\theta$, and phase angle $\phi$ of the membrane rotation. At high shear…

Soft Condensed Matter · Physics 2009-08-07 Hiroshi Noguchi

We studied the swimming of \textit{Escherichia coli} bacteria in the vicinity of the critical point in a solution of the non-ionic surfactant \chem{C_{12}E_{5}} in buffer solution. In phase contrast microscopy, each swimming cell produces a…

Soft Condensed Matter · Physics 2018-08-07 Nick Koumakis , Clémence Devailly , Wilson C. K. Poon

The swimming motility of bacteria is driven by the action of bacterial flagellar motors, whose outermost structure is a long and thin helicoidal filament. When rotated, the fluid medium exerts an anisotropic viscous drag on the flagellar…

Through high-fidelity numerical simulation, the simple shear flow over regularly arranged micro pillars has been investigated. The essential issues to be addressed include the characteristics of a simple shear flow over quadrilateral array…

Fluid Dynamics · Physics 2022-03-14 Yanxing Wang , Hui Wan , Tie Wei , Fangjun Shu

During colony growth, complex interactions regulate the bacterial orientation, leading to the formation of large-scale ordered structures, including topological defects and microdomains. These structures may benefit bacterial strains,…

Biological Physics · Physics 2024-04-10 Mustafa Başaran , Y. Ilker Yaman , Tevfik Can Yuce , Roman Vetter , Askin Kocabas

We present a detailed comparison of the rheological behaviour of sheared sediment beds in a pressure-driven, straight channel configuration based on data that was generated by means of fully coupled, grain-resolved direct numerical…

Fluid Dynamics · Physics 2021-07-21 B. Vowinckel , E. Biegert , E. Meiburg , P. Aussillous , É. Guazzelli

We study the spatial distribution of gyrotactic microorganisms transported by a three-dimensional turbulent flow generated by direct numerical simulations. We find that gyrotaxis combines with turbulent fluctuations to produce small scales…

Chaotic Dynamics · Physics 2012-06-13 Filippo De Lillo , Guido Boffetta , Massimo Cencini

Bacterial cells navigate around their environment by directing their movement along chemical gradients. This process, known as chemotaxis, can promote the rapid expansion of bacterial populations into previously unoccupied territories.…

Populations and Evolution · Quantitative Biology 2022-06-08 Avaneesh V. Narla , Jonas Cremer , Terry Hwa

Randomly moving active particles can be herded into directed motion by asymmetric geometric structures. Although such a rectification process has been extensively studied due to its fundamental, biological, and technological relevance, a…

Soft Condensed Matter · Physics 2026-03-31 Satyam Anand , Xiaolei Ma , Shuo Guo , Stefano Martiniani , Xiang Cheng

The flow of dense suspensions, glasses, and granular materials is heavily influenced by frictional interactions between constituent particles. However, neither hydrodynamics nor friction has successfully explained the full range of flow…

Bacterial swarming is a rapid mass-migration, in which thousands of cells spread collectively to colonize a surface. Physically, swarming is a natural example of active particles that use energy to generate motion. Accordingly,…

Soft Condensed Matter · Physics 2019-11-14 Avraham Be`er , Bella Ilkanaiv , Renan Gross , Daniel B. Kearns , Sebastian Heidenreich , Markus Bär , Gil Ariel

We study the chemotaxis of a population of genetically identical swimming bacteria undergoing run and tumble dynamics driven by stochastic switching between clockwise and counterclockwise rotation of the flagellar rotary system.…

Cell Behavior · Quantitative Biology 2020-07-17 Margaritis Voliotis , Jerko Rosko , Teuta Pilizota , Tanniemola Liverpool

The activity of growing living bacteria was investigated using real-time and in situ rheology -- in stationary and oscillatory shear. Two different strains of the human pathogen Staphylococcus aureus -- strain COL and its isogenic cell wall…

Biological Physics · Physics 2015-06-19 P. Patricio , P. L. Almeida , R. Portela , R. G. Sobral , I. R. Grilo , T. Cidade , C. R. Leal

Fluidized granular media have a rich rheology: measuring shear stress $\sigma$ as a function of shear rate $\dot\gamma$, they exhibit Newtonian behavior $\sigma\sim\dot\gamma$ for low densities and shear rates, develop a yield stress for…

Soft Condensed Matter · Physics 2023-09-04 Olfa D'Angelo , Abhishek Shetty , Matthias Sperl , W. Till Kranz

We present an experimental study of the flow dynamics of a lamellar phase sheared in the Couette geometry. High-frequency ultrasonic pulses at 36 MHz are used to measure time-resolved velocity profiles. Oscillations of the viscosity occur…

Soft Condensed Matter · Physics 2007-05-23 Sebastien Manneville , Jean-Baptiste Salmon , Annie Colin

We probe the flow of two dimensional foams, consisting of a monolayer of bubbles sandwiched between a liquid bath and glass plate, as a function of driving rate, packing fraction and degree of disorder. First, we find that bidisperse,…

Soft Condensed Matter · Physics 2015-05-13 Gijs Katgert , Andrzej Latka , Matthias E. Möbius , Martin van Hecke

Understanding mixing and transport of passive scalars in active fluids is important to many natural (e.g. algal blooms) and industrial (e.g. biofuel, vaccine production) processes. Here, we study the mixing of a passive scalar (dye) in…