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We extend results regarding a combinatorial model introduced by Black, Drellich, and Tymoczko (2017+) which generalizes the folding of the RNA molecule in biology. Consider a word on alphabet $\{A_1, \overline{A}_1, \ldots, A_m,…
We discuss inequalities holding between the vocabulary size, i.e., the number of distinct nonterminal symbols in a grammar-based compression for a string, and the excess length of the respective universal code, i.e., the code-based analog…
Binary jumbled pattern matching asks to preprocess a binary string $S$ in order to answer queries $(i,j)$ which ask for a substring of $S$ that is of length $i$ and has exactly $j$ 1-bits. This problem naturally generalizes to…
We prove a precise formula for the minimal number K(n) such that every binary word of length $n$ can be divided into K(n) palindromes. Also we estimate the average number $\ol K(n)$ of palindromes composing a random binary word of the…
We consider the number of occurrences of subwords (non-consecutive sub-sequences) in a given word. We first define the notion of subword entropy of a given word that measures the maximal number of occurrences among all possible subwords. We…
Given a countable set X (usually taken to be the natural numbers or integers), an infinite permutation, \pi, of X is a linear ordering of X. This paper investigates the combinatorial complexity of infinite permutations on the natural…
A binary shuffle square is a binary word of even length that can be partitioned into two disjoint, identical subwords. Huang, Nam, Thaper, and the first author conjectured that as $n\rightarrow \infty$, asymptotically half of all binary…
We study the problem of generating interesting integer sequences with a combinatorial interpretation. For this we introduce a two-step approach. In the first step, we generate first-order logic sentences which define some combinatorial…
In combinatorics on words, a word w of length n over an alphabet of size q is said to be privileged if n <= 1 or if n >= 2 and w has a privileged border that occurs exactly twice in w. Forsyth, Jayakumar and Shallit proved that there exist…
An infinite word is an infinite Lyndon word if it is smaller, with respect to the lexicographic order, than all its proper suffixes, or equivalently if it has infinitely many finite Lyndon words as prefixes. A characterization of binary…
Grammar compression is a general compression framework in which a string $T$ of length $N$ is represented as a context-free grammar of size $n$ whose language contains only $T$. In this paper, we focus on studying the limitations of…
Classically in combinatorics on words one studies unavoidable regularities that appear in sufficiently long strings of symbols over a fixed size alphabet. In this paper we take another viewpoint and focus on combinatorial properties of long…
We refine a uniform algebraic approach for deriving upper bounds on reset thresholds of synchronizing automata. We express the condition that an automaton is synchronizing in terms of linear algebra, and obtain upper bounds for the reset…
We consider a type of long-range percolation problem on the positive integers, motivated by earlier work of others on the appearance of (in)finite words within a site percolation model. The main issue is whether a given infinite binary word…
We show that the number of length-n words over a k-letter alphabet having no even palindromic prefix is the same as the number of length-n unbordered words, by constructing an explicit bijection between the two sets. A slightly different…
The sequential structure of language, and the order of words in a sentence specifically, plays a central role in human language processing. Consequently, in designing computational models of language, the de facto approach is to present…
The Binary Jumbled String Matching problem is defined as: Given a string $s$ over $\{a,b\}$ of length $n$ and a query $(x,y)$, with $x,y$ non-negative integers, decide whether $s$ has a substring $t$ with exactly $x$ $a$'s and $y$ $b$'s.…
Given a countable set X (usually taken to be N or Z), an infinite permutation $\pi$ of X is a linear ordering $<_\pi$ of X. This paper investigates the combinatorial complexity of infinite permutations on N associated with the image of…
The avoidability, or unavoidability of patterns in words over finite alphabets has been studied extensively. A word (pattern) over a finite set is said to be unavoidable if, for all but finitely many words, there exists a morphism mapping…
We give a ranker-based description using finite-index congruences for the variety $\boldsymbol{\mathrm{DAb}}$ of finite monoids whose regular $\mathcal{D}$-classes form Abelian groups. This combinatorial description yields a normal form for…