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The Random Phase Approximation (RPA) for correlation energy in the grid-based projector augmented wave (gpaw) code is accelerated by porting to the Graphics Processing Unit (GPU) architecture. The acceleration is achieved by grouping…

Computational Physics · Physics 2013-07-31 Jun Yan , Lin Li , Christopher O'Grady

The Graph Burning Problem (GBP) is a combinatorial optimization problem that has gained relevance as a tool for quantifying a graph's vulnerability to contagion. Although it is based on a very simple propagation model, its decision version…

Most methods for Bundle Adjustment (BA) in computer vision are either centralized or operate incrementally. This leads to poor scaling and affects the quality of solution as the number of images grows in large scale structure from motion…

Computer Vision and Pattern Recognition · Computer Science 2017-08-29 Karthikeyan Natesan Ramamurthy , Chung-Ching Lin , Aleksandr Aravkin , Sharath Pankanti , Raphael Viguier

Designing and implementing efficient, provably correct parallel machine learning (ML) algorithms is challenging. Existing high-level parallel abstractions like MapReduce are insufficiently expressive while low-level tools like MPI and…

Machine Learning · Computer Science 2014-08-12 Yucheng Low , Joseph E. Gonzalez , Aapo Kyrola , Danny Bickson , Carlos E. Guestrin , Joseph Hellerstein

Designing and implementing efficient, provably correct parallel machine learning (ML) algorithms is challenging. Existing high-level parallel abstractions like MapReduce are insufficiently expressive while low-level tools like MPI and…

Machine Learning · Computer Science 2010-06-28 Yucheng Low , Joseph Gonzalez , Aapo Kyrola , Danny Bickson , Carlos Guestrin , Joseph M. Hellerstein

We study dynamic graph algorithms in the Massively Parallel Computation model, which was inspired by practical data processing systems. Our goal is to provide algorithms that can efficiently handle large batches of edge insertions and…

Data Structures and Algorithms · Computer Science 2021-01-12 Krzysztof Nowicki , Krzysztof Onak

Belief Propagation (BP) is a powerful algorithm for distributed inference in probabilistic graphical models, however it quickly becomes infeasible for practical compute and memory budgets. Many efficient, non-parametric forms of BP have…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-30 Tom Yates , Yuzhou Cheng , Ignacio Alzugaray , Danyal Akarca , Pedro A. M. Mediano , Andrew J. Davison

On an evolving graph that is continuously updated by a high-velocity stream of edges, how can one efficiently maintain if two vertices are connected? This is the connectivity problem, a fundamental and widely studied problem on graphs. We…

Data Structures and Algorithms · Computer Science 2016-02-18 Natcha Simsiri , Kanat Tangwongsan , Srikanta Tirthapura , Kun-Lung Wu

Belief Propagation (BP) is an important message-passing algorithm for various reasoning tasks over graphical models, including solving the Constraint Optimization Problems (COPs). It has been shown that BP can achieve state-of-the-art…

Artificial Intelligence · Computer Science 2022-09-27 Yanchen Deng , Shufeng Kong , Caihua Liu , Bo An

The Graph Isomorphism (GI) problem is a theoretically interesting problem because it has not been proven to be in P nor to be NP-complete. Babai made a breakthrough in 2015 when announcing a quasipolynomial time algorithm for GI problem.…

Data Structures and Algorithms · Computer Science 2020-02-13 Duc Hung Pham , Krishna V. Palem , M. V. Panduranga Rao

Deep learning systems have been successfully applied to Euclidean data such as images, video, and audio. In many applications, however, information and their relationships are better expressed with graphs. Graph Convolutional Networks…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-14 Tong Geng , Ang Li , Runbin Shi , Chunshu Wu , Tianqi Wang , Yanfei Li , Pouya Haghi , Antonino Tumeo , Shuai Che , Steve Reinhardt , Martin Herbordt

The graphics processing unit (GPU) has emerged as a powerful and cost effective processor for general performance computing. GPUs are capable of an order of magnitude more floating-point operations per second as compared to modern central…

Computation · Statistics 2012-07-24 Mark Franey , Pritam Ranjan , Hugh Chipman

New algorithms for embedding graphs have reduced the asymptotic complexity of finding low-dimensional representations. One-Hot Graph Encoder Embedding (GEE) uses a single, linear pass over edges and produces an embedding that converges…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-08 Ariel Lubonja , Cencheng Shen , Carey Priebe , Randal Burns

Connected components and spanning forest are fundamental graph algorithms due to their use in many important applications, such as graph clustering and image segmentation. GPUs are an ideal platform for graph algorithms due to their high…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-28 Changwan Hong , Laxman Dhulipala , Julian Shun

Graph-structured data is ubiquitous in the real world, and Graph Neural Networks (GNNs) have become increasingly popular in various fields due to their ability to process such irregular data directly. However, as data scale, GNNs become…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-10 Xianfeng Song , Yi Zou , Zheng Shi

Betweenness Centrality (BC) is steadily growing in popularity as a metrics of the influence of a vertex in a graph. The BC score of a vertex is proportional to the number of all-pairs-shortest-paths passing through it. However, complete and…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-22 Flavio Vella , Giancarlo Carbone , Massimo Bernaschi

Bloom filters are a fundamental data structure for approximate membership queries, with applications ranging from data analytics to databases and genomics. Several variants have been proposed to accommodate parallel architectures. GPUs,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-18 Daniel Jünger , Kevin Kristensen , Yunsong Wang , Xiangyao Yu , Bertil Schmidt

Finding maximum-weight independent sets in graphs is an important NP-hard optimization problem. Given a vertex-weighted graph $G$, the task is to find a subset of pairwise non-adjacent vertices of $G$ with maximum weight. Most recently…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-16 Jannick Borowitz , Ernestine Großmann , Mattthias Schimek

The discoveries in this paper show that Intelligence Processing Units (IPUs) offer a viable accelerator alternative to GPUs for machine learning (ML) applications within the fields of materials science and battery research. We investigate…

Machine Learning · Computer Science 2024-04-23 Hieu Le , Zhenhua He , Mai Le , Dhruva K. Chakravorty , Lisa M. Perez , Akhil Chilumuru , Yan Yao , Jiefu Chen

More and more large data collections are gathered worldwide in various IT systems. Many of them possess the networked nature and need to be processed and analysed as graph structures. Due to their size they require very often usage of…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-06-04 Tomasz Kajdanowicz , Przemyslaw Kazienko , Wojciech Indyk