Related papers: Robust Identification of Gene-Environment Interact…
Federated learning provides a communication-efficient and privacy-preserving training process by enabling learning statistical models with massive participants while keeping their data in local clients. However, standard federated learning…
Many adversarial defense methods have been proposed to enhance the adversarial robustness of natural language processing models. However, most of them introduce additional pre-set linguistic knowledge and assume that the synonym candidates…
Test-Time Adaptation (TTA) aims to enhance the generalization of deep learning models when faced with test data that exhibits distribution shifts from the training data. In this context, only a pre-trained model and unlabeled test data are…
The impact of inference-time data perturbation (e.g., adversarial attacks) has been extensively studied in machine learning, leading to well-established certification techniques for adversarial robustness. In contrast, certifying models…
We propose AFTNet, a novel network-constraint survival analysis method based on the Weibull accelerated failure time (AFT) model solved by a penalized likelihood approach for variable selection and estimation. When using the log-linear…
Stepped-wedge cluster randomized trials (SW-CRTs) evaluate interventions rolled out across clusters over time. Standard analyses typically use immediate-treatment (IT) models, which assume effects begin at crossover and remain constant…
It is well-known that deep learning models are vulnerable to small input perturbations. Such perturbed instances are called adversarial examples. Adversarial examples are commonly crafted to fool a model either at training time (poisoning)…
The analysis of the interaction matrix between two distinct sets is essential across diverse fields, from pharmacovigilance to transcriptomics. Not all interactions are equally informative: a marker gene associated with a few specific…
Genetic association analyses often involve data from multiple potentially-heterogeneous subgroups. The expected amount of heterogeneity can vary from modest (e.g., a typical meta-analysis) to large (e.g., a strong gene--environment…
Gait recognition is widely used in social security applications due to its advantages in long-distance human identification. Recently, sequence-based methods have achieved high accuracy by learning abundant temporal and spatial information.…
Generative Adversarial Networks (GANs) have shown impressive results in various image synthesis tasks. Vast studies have demonstrated that GANs are more powerful in feature and expression learning compared to other generative models and…
Adversarial examples pose many security threats to convolutional neural networks (CNNs). Most defense algorithms prevent these threats by finding differences between the original images and adversarial examples. However, the found…
This paper proposes a novel, data-agnostic, model poisoning attack on Federated Learning (FL), by designing a new adversarial graph autoencoder (GAE)-based framework. The attack requires no knowledge of FL training data and achieves both…
In this paper we consider the problem of learning the genetic-interaction-map, i.e., the topology of a directed acyclic graph (DAG) of genetic interactions from noisy double knockout (DK) data. Based on a set of well established biological…
This paper proposes a robust Bayesian accelerated failure time model for censored survival data. We develop a new family of life-time distributions using a scale mixture of the generalized gamma distributions, where we propose a novel super…
We study the estimation of the ATE in randomized controlled trials under a dynamically evolving interference structure. This setting arises in applications such as ride-sharing, where drivers move over time, and social networks, where…
Much of the natural variation for a complex trait can be explained by variation in DNA sequence levels. As part of sequence variation, gene-gene interaction has been ubiquitously observed in nature, where its role in shaping the development…
Gene expression-based heterogeneity analysis has been extensively conducted. In recent studies, it has been shown that network-based analysis, which takes a system perspective and accommodates the interconnections among genes, can be more…
With the advance of high-throughput sequencing technologies, it has become feasible to investigate the influence of the entire spectrum of sequencing variations on complex human diseases. Although association studies utilizing the new…
Randomized controlled trials (RCTs) are widely regarded as the gold standard for causal inference in biomedical research. For instance, when estimating the average treatment effect on the treated (ATT), a doubly robust estimation procedure…