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Friction is central to the motion of active (self-propelled) objects such as bacteria, animals, and robots. While in a viscous fluid friction is described by Stokes's law, objects in contact with other solid bodies are often governed by…

Soft Condensed Matter · Physics 2024-11-12 Alexander P. Antonov , Lorenzo Caprini , Anton Ldov , Christian Scholz , Hartmut Löwen

During the past century, biologists and mathematicians investigated two mechanisms underlying bacteria motion: the run phase during which bacteria move in straight lines and the tumble phase in which they change their orientation. When…

Analysis of PDEs · Mathematics 2025-05-19 Alain Blaustein

The cytoplasm and biomembranes in biological cells contain large numbers of proteins that cyclically change their shapes. They are molecular machines that can function as molecular motors or carry out many other tasks in the cell. We…

Soft Condensed Matter · Physics 2016-02-17 Alexander Mikhailov , Raymond Kapral

Experiments have found that diffusion in metabolically active cells is much faster than in dormant cells, especially for large particles. However, the mechanism of this size-dependent diffusion enhancement in living cells is still unclear.…

Biological Physics · Physics 2023-04-04 Lingyu Meng , Yiteng Jin , Yichao Guan , Jiayi Xu , Jie Lin

Actuation remains a signifcant challenge in soft robotics. Actuation by light has important advantages: objects can be actuated from a distance, distinct frequencies can be used to actuate and control distinct modes with minimal…

Soft Condensed Matter · Physics 2019-09-09 Kevin Korner , Basile Audoly , Kaushik Bhattacharya

We consider active Brownian particles that intermittently switch between active and inactive states. Such behavior is ubiquitous at all scales, from bacteria to animals and in artificial active systems. We derive exact expressions for key…

Statistical Mechanics · Physics 2025-09-24 Fernando Peruani , Debasish Chaudhuri

The onset of light-induced bioconvection via linear stability theory is investigated qualitatively for a suspension of phototactic algae. The forward scattering algal suspension is uniformly illuminated by both diffuse and oblique…

Dynamical Systems · Mathematics 2023-03-17 M. K. Panda , S. K. Rajput

Chemotaxis of bacterial swimmers that move in a run-and-turn pattern is well studied in uniform bulk fluid. It is primarily based on modulating the run time in dependence on the swimming direction with respect to the source of…

Soft Condensed Matter · Physics 2025-03-10 Sönke Beier , Veronika Pfeifer , Agniva Datta , Robert Großmann , Carsten Beta

In this study, we aim to explore the behavior of microorganisms in response to natural lighting conditions, considering the off-normal angles at which the sun strikes the Earth's surface. To achieve this, we investigate the effect of…

Soft Condensed Matter · Physics 2023-08-09 S. K. Rajput

We consider sedimented at a solid wall particles that are immersed in water containing small additives of photosensitive ionic surfactants. It is shown that illumination with an appropriate wavelength, a beam intensity profile, shape and…

Photosynthesis is arguably the fundamental process of Life, since it enables energy from the Sun to enter the food-chain on Earth. It is a remarkable non-equilibrium process in which photons are converted to many-body excitations which…

Soft Condensed Matter · Physics 2015-05-19 Felipe Caycedo-Soler , Ferney J. Rodríguez , Luis Quiroga , Neil F. Johnson

Photosynthetic systems utilize adaptability to respond efficiently to fluctuations in their light environment. As a result, large photosynthetic yields can be achieved in conditions of low light intensity, while photoprotection mechanisms…

Biological Physics · Physics 2020-01-16 Adriana M. De Mendoza , Felipe Caycedo-Soler , Susana F. Huelga , Martin B. Plenio

Phototaxis is one of the most fundamental stimulus-response behaviors in biology wherein motile micro-organisms sense light gradients to swim towards the light source. Apart from single cell survival and growth, it plays a major role at the…

Soft Condensed Matter · Physics 2020-01-08 Sujeet Kumar Choudhary , Aparna Baskaran , Prerna Sharma

We study the surface diffusion of the model cyanobacterium Synechocystis sp. PCC $6803$ during the incipient stages of cell contact with a glass surface in the dilute regime. We observe a twitching motility with alternating immobile…

The bacterium E. coli maneuvers itself to regions with high chemoattractant concentrations by performing two stereotypical moves: `runs', in which it moves in near straight lines, and `tumbles', in which it does not advance but changes…

Cell Behavior · Quantitative Biology 2007-11-29 Yariv Kafri , Rava Azeredo da Silveira

Motile bacteria are known to accumulate at surfaces, eventually leading to changes in bacterial motility and bio-film formation. We use a novel two-colour, three-dimensional Lagrangian tracking technique, to follow simultaneously the body…

We study how simple eukaryotic organisms make decisions in response to competing stimuli in the context of phototaxis by the unicellular alga $Chlamydomonas~reinhardtii$. While negatively phototactic cells swim directly away from a…

Living organisms are molecular systems with self-sustained dynamics via energy conversion through molecular cooperation, resulting in highly complex macroscopic behaviors. Construction of such autonomous macroscopic dynamics at a molecular…

Biological microswimmers often inhabit a porous or crowded environment such as soil. In order to understand how such a complex environment influences their spreading, we numerically study non-interacting active Brownian particles (ABPs) in…

Soft Condensed Matter · Physics 2016-12-06 Maria Zeitz , Holger Stark

We confine a dense suspension of motile \textit{Escherichia coli} inside a spherical droplet in a water-in-oil emulsion, creating a "bacterially" propelled droplet. We show that droplets move in a persistent random walk, with a persistence…

Soft Condensed Matter · Physics 2019-12-10 Gabriel Ramos , Maria Luisa Cordero , Rodrigo Soto