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Plant-pollinator associations are often seen as purely mutualistic, while in reality they can be more complex. Indeed they may also display a diverse array of antagonistic interactions, such as competition and victim--exploiter…

Populations and Evolution · Quantitative Biology 2016-07-21 Tomás A. Revilla , Francisco Encinas-Viso

We apply the theory of learning to physically renormalizable systems in an attempt to develop a theory of biological evolution, including the origin of life, as multilevel learning. We formulate seven fundamental principles of evolution…

Populations and Evolution · Quantitative Biology 2022-10-12 Vitaly Vanchurin , Yuri I. Wolf , Mikhail I. Katsnelson , Eugene V. Koonin

Due to the conventional distinction between ecological (rapid) and evolutionary (slow)timescales, ecological and population models to date have typically ignored the effects of evolution. Yet the potential for rapid evolutionary change has…

Populations and Evolution · Quantitative Biology 2012-11-20 Laura E. Jones , Stephen P. Ellner

This paper reviews habitability conditions for a terrestrial planet from the point of view of geosciences. It addresses how interactions between the interior of a planet or a moon and its atmosphere and surface (including hydrosphere and…

A simple stochastic model for evolution, based upon the need to pass a sequence of n critical steps (Carter 1983, Watson 2008) is applied to both terrestrial and extraterrestrial origins of life. In the former case, the time at which humans…

Earth and Planetary Astrophysics · Physics 2011-04-22 Michael McCabe , Holly Lucas

Mixed microbial communities, usually composed of various bacterial and fungal species, are fundamental in a plethora of environments, from soil to human gut and skin. Their evolution is a paradigmatic example of intertwined dynamics, where…

Populations and Evolution · Quantitative Biology 2022-07-01 Andrea Roli , Stuart A. Kauffman

We propose a class of evolutionary models that involves an arbitrary exchangeable process as the breeding process and different selection schemes. In those models, a new genome is born according to the breeding process, and then a genome is…

Neural and Evolutionary Computing · Computer Science 2020-08-25 Jüri Lember , Chris Watkins

Using a bit-string model of evolution, we find a successful route to diploidy and sex in simple organisms. Allowing the sexually reproducing diploid individuals to also perform mitosis, as they do in a haploid-diploid cycle, leads to the…

Soft Condensed Matter · Physics 2007-05-23 Erkan Tuzel , Volkan Sevim , Ayse Erzan

We study the probabilities of evolution based on random mutations and natural selection. We conclude that evolution to multicellular eukaryots, or even prokaryots, is unlikely to be the result of only random mutations. Complex organisms…

Populations and Evolution · Quantitative Biology 2007-05-23 B. Hoeneisen , G. Trueba

Involution, a phenomenon of excessive competition with diminishing returns, has become a pressing socio-economic concern in contemporary China, prompting both academic inquiry and policy interventions. This paper proposes an evolutionary…

Physics and Society · Physics 2026-03-16 Bo Li , Qiwen Ge , Yong Shi

It is argued that the tight interconnection between biological, climatological, and geophysical factors in the history of the terrestrial biosphere can teach us something of wider importance regarding the general astrobiological evolution…

Astrophysics · Physics 2017-06-14 Milan M. Cirkovic

We develop a classification scheme for the evolutionary state of planets based on the non-equilibrium thermodynamics of their coupled systems, including the presence of a biosphere and the possibility of what we call an agency-dominated…

Earth and Planetary Astrophysics · Physics 2017-08-29 Adam Frank , Axel Kleidon , Marina Alberti

Evolution occurs in populations of reproducing individuals. It is well known that population structure can affect evolutionary dynamics. Traditionally, natural selection is studied between mutants that differ in reproductive rate, but are…

Populations and Evolution · Quantitative Biology 2021-11-23 Josef Tkadlec , Kamran Kaveh , Krishnendu Chatterjee , Martin A. Nowak

In phylogenetic studies, the evolution of molecular sequences is assumed to have taken place along the phylogeny traced by the ancestors of extant species. In the presence of lateral gene transfer (LGT), however, this may not be the case,…

Populations and Evolution · Quantitative Biology 2013-07-01 Gergely J Szöllösi , Eric Tannier , Nicolas Lartillot , Vincent Daubin

Anthropogenic changes of the biota and human hyper-dominance are modulating the evolution of life on our planet. Humankind has spread worldwide supported by cultural and technological knowledge, and has already modified uncountable…

Populations and Evolution · Quantitative Biology 2018-12-17 Pablo J. F. Pena Rodrigues , Catarina Fonseca Lira

Transposons are small, self-replicating DNA sequences found in every branch of life. Often, one transposon will parasitize another, forming a tiny intracellular ecosystem. In some species these ecosystems thrive, while in others they go…

Populations and Evolution · Quantitative Biology 2025-05-21 Aria Yom , Nathan E. Lewis

We discuss a simple model of co-evolution. In order to emphasise the effect of interaction between individuals the entire population is subjected to the same physical environment. Species are emergent structures and extinction, origination…

Statistical Mechanics · Physics 2007-05-23 Kim Christensen , Simone A. di Collobiano , Matt Hall , Henrik J. Jensen

Indirect reciprocity is one of the main mechanisms to explain the emergence and sustainment of altruism in societies. The standard approach to indirect reciprocity are reputation models. These are games in which players base their decisions…

Physics and Society · Physics 2013-05-29 Luis A. Martinez-Vaquero , José A. Cuesta

Life forms exhibit such a degree of exquisite organization that it seems impossible that they could have developed out of a process of trial and error, as intimated by the theory of Darwinian evolution. In this general public paper I…

Populations and Evolution · Quantitative Biology 2019-01-08 Luca Peliti

We find that the hypothesis made by Jan, Stauffer and Moseley [Theory in Biosc., 119, 166 (2000)] for the evolution of sex, namely a strategy devised to escape extinction due to too many deleterious mutations, is sufficient but not…

Soft Condensed Matter · Physics 2009-11-07 Erkan Tuzel , Volkan Sevim , Ayse Erzan
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