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In this paper, we discuss the utility and deficiencies of existing ontology resources for a number of language processing applications. We describe a technique for increasing the semantic type coverage of a specific ontology, the National…

Computation and Language · Computer Science 2007-05-23 J. Pustejovsky , A. Rumshisky , J. Castano

External knowledge is often useful for natural language understanding tasks. We introduce a contextual text representation model called Conceptual-Contextual (CC) embeddings, which incorporates structured knowledge into text…

Computation and Language · Computer Science 2020-03-13 Xiao Zhang , Dejing Dou , Ji Wu

The extraction and analysis of insights from medical data, primarily stored in free-text formats by healthcare workers, presents significant challenges due to its unstructured nature. Medical coding, a crucial process in healthcare, remains…

Computation and Language · Computer Science 2024-05-28 Mikhail Kulyabin , Gleb Sokolov , Aleksandr Galaida , Andreas Maier , Tomas Arias-Vergara

Abstractive text summarization aims at compressing the information of a long source document into a rephrased, condensed summary. Despite advances in modeling techniques, abstractive summarization models still suffer from several key…

Computation and Language · Computer Science 2021-02-17 Vidhisha Balachandran , Artidoro Pagnoni , Jay Yoon Lee , Dheeraj Rajagopal , Jaime Carbonell , Yulia Tsvetkov

We propose Medical Entity Definition-based Sentence Embedding (MED-SE), a novel unsupervised contrastive learning framework designed for clinical texts, which exploits the definitions of medical entities. To this end, we conduct an…

Machine Learning · Computer Science 2022-12-12 Hyeonbin Hwang , Haanju Yoo , Yera Choi

Semantic concepts and relations encoded in domain-specific ontologies and other medical semantic resources play a crucial role in deciphering terms in medical queries and documents. The exploitation of these resources for tackling the…

Information Retrieval · Computer Science 2020-05-19 Mohammed Maree , Israa Noor , Khaled Rabayah , Mohammed Belkhatir , Saadat M. Alhashmi

Text summarization is an interesting area for researchers to develop new techniques to provide human like summaries for vast amounts of information. Summarization techniques tend to focus on providing accurate representation of content, and…

Information Retrieval · Computer Science 2018-02-28 Mayank Chaudhari , Aakash Nelson Mattukoyya

Twitter customer service interactions have recently emerged as an effective platform to respond and engage with customers. In this work, we explore the role of negation in customer service interactions, particularly applied to sentiment…

Computation and Language · Computer Science 2019-06-12 Amita Misra , Mansurul Bhuiyan , Jalal Mahmud , Saurabh Tripathy

We present a system that constructs and maintains an up-to-date co-occurrence network of medical concepts based on continuously mining the latest biomedical literature. Users can explore this network visually via a concise online interface…

Information Retrieval · Computer Science 2015-03-20 Alexei Yavlinsky

Biological data and knowledge bases increasingly rely on Semantic Web technologies and the use of knowledge graphs for data integration, retrieval and federated queries. We propose a solution for automatically semantifying biological…

Artificial Intelligence · Computer Science 2021-12-03 Marco Anteghini , Jennifer D'Souza , Vitor A. P. Martins dos Santos , Sören Auer

Business communication digitisation has reorganised the process of persuasive discourse, which allows not only greater transparency but also advanced deception. This inquiry synthesises classical rhetoric and communication psychology with…

Computation and Language · Computer Science 2025-08-14 Sayem Hossen , Monalisa Moon Joti , Md. Golam Rashed

Clinical notes contain an extensive record of a patient's health status, such as smoking status or the presence of heart conditions. However, this detail is not replicated within the structured data of electronic health systems.…

Computation and Language · Computer Science 2020-09-18 Andriy Mulyar , Elliot Schumacher , Masoud Rouhizadeh , Mark Dredze

Crucial information about the practice of healthcare is recorded only in free-form text, which creates an enormous opportunity for high-impact NLP. However, annotated healthcare datasets tend to be small and expensive to obtain, which…

Computation and Language · Computer Science 2019-04-09 Yifeng Tao , Bruno Godefroy , Guillaume Genthial , Christopher Potts

Many real systems have been modelled in terms of network concepts, and written texts are a particular example of information networks. In recent years, the use of network methods to analyze language has allowed the discovery of several…

Computation and Language · Computer Science 2016-06-28 Henrique F. de Arruda , Luciano da F. Costa , Diego R. Amancio

After decades of use in dictation and, more recently, ambient documentation, speech is emerging as a primary modality for interacting with technology and AI in healthcare. Yet medical speech recognition remains difficult: systems must…

Machine Learning · Computer Science 2026-05-22 Arne Nix , Robert James , Lasse Borgholt , Anna B. Ekner , Lana Krumm , Julius Severin , Dan Engel , Lars Maaløe , Jakob Havtorn

We introduce an explainability method for biomedical hypothesis generation systems, built on top of the novel Hypothesis Generation Context Retriever framework. Our approach combines semantic graph-based retrieval and relevant…

Information Retrieval · Computer Science 2025-11-11 Ilya Tyagin , Saeideh Valipour , Aliaksandra Sikirzhytskaya , Michael Shtutman , Ilya Safro

The accurate recognition of symptoms in clinical reports is significantly important in the fields of healthcare and biomedical natural language processing. These entities serve as essential building blocks for clinical information…

Computation and Language · Computer Science 2024-01-30 Mai A. Shaaban , Abbas Akkasi , Adnan Khan , Majid Komeili , Mohammad Yaqub

Document summarization provides an instrument for faster understanding the collection of text documents and has several real-life applications. With the growth of online text data, numerous summarization models have been proposed recently.…

Computation and Language · Computer Science 2022-04-01 Mingyang Song , Liping Jing

Existing medical RAG systems mainly leverage knowledge from medical knowledge bases, neglecting the crucial role of experiential knowledge derived from similar patient cases -- a key component of human clinical reasoning. To bridge this…

Computation and Language · Computer Science 2025-05-27 Yuxing Lu , Gecheng Fu , Wei Wu , Xukai Zhao , Sin Yee Goi , Jinzhuo Wang

Considering that words with different characteristic in the text have different importance for classification, grouping them together separately can strengthen the semantic expression of each part. Thus we propose a new text representation…

Computation and Language · Computer Science 2019-06-19 Xiaoye Tan , Rui Yan , Chongyang Tao , Mingrui Wu
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