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A hierarchical structure describing the inter-relationships of species has long been a fundamental concept in systematic biology, from Linnean classification through to the more recent quest for a 'Tree of Life.' In this paper we use an…

Populations and Evolution · Quantitative Biology 2009-08-21 Andreas Dress , Vincent Moulton , Mike Steel , Taoyang Wu

A key question in evolution is how likely a mutant is to take over. This depends on natural selection and on stochastic fluctuations. Population spatial structure can impact mutant fixation probabilities. We introduce a model for structured…

Populations and Evolution · Quantitative Biology 2021-11-23 Loïc Marrec , Irene Lamberti , Anne-Florence Bitbol

We investigate how the pattern of contacts between species in mutualistic ecosystems is affected by the phylogenetic proximity between the species of each guild. We develop a dynamical model geared to establish the role of such proximity in…

Populations and Evolution · Quantitative Biology 2011-10-18 R. P. J. Perazzo , Laura Hernández , Horacio Ceva , Enrique Burgos , José Ignacio Alvarez-Hamelin

Standard neutral population genetics theory with a strictly fixed population size has important limitations. An alternative model that allows independently fluctuating population sizes and reproduces the standard neutral evolution is…

Populations and Evolution · Quantitative Biology 2017-03-08 Thiparat Chotibut , David R. Nelson

We present a model for a threshold-based resource redistribution process in a spatially-explicit population, characterizing the relation between kinship network structure, local interactions and persistence. We find that population survival…

Populations and Evolution · Quantitative Biology 2026-02-09 Alina Kochocki

Species sampling processes have long served as the fundamental framework for modeling random discrete distributions and exchangeable sequences. However, data arising from distinct but related sources require a broader notion of…

Statistics Theory · Mathematics 2026-02-03 Beatrice Franzolini , Antonio Lijoi , Igor Prünster , Giovanni Rebaudo

Many groups possess highly symmetric generating sets that are naturally endowed with an underlying combinatorial structure. Such generating sets can prove to be extremely useful both theoretically in providing new existence proofs for…

Group Theory · Mathematics 2010-04-22 Ben Fairbairn

Speciation is driven by many different factors. Among those are trade-offs between different ways an organism utilizes resources, and these trade-offs can constrain the manner in which selection can optimize traits. Limited migration among…

Populations and Evolution · Quantitative Biology 2014-08-12 Bjørn Østman , Randall Lin , Christoph Adami

Exploiting the mathematical curiosity of intransitive dice, we present a simple theoretical model for co-evolution that captures scales ranging from the genome of the individual to the system-wide emergence of species diversity. We study a…

Populations and Evolution · Quantitative Biology 2022-12-02 Julius B. Kirkegaard , Kim Sneppen

Group interactions occur frequently in social settings, yet their properties beyond pairwise relationships in network models remain unexplored. In this work, we study homophily, the nearly ubiquitous phenomena wherein similar individuals…

Social and Information Networks · Computer Science 2022-07-26 Arnab Sarker , Natalie Northrup , Ali Jadbabaie

We study the genealogical distance of two randomly chosen individuals in a population that evolves according to a two type Moran model with mutation and selection. We prove that this distance is stochastically smaller than the corresponding…

Probability · Mathematics 2018-04-24 Max Grieshammer

Affinity propagation is an exemplar-based clustering algorithm that finds a set of data-points that best exemplify the data, and associates each datapoint with one exemplar. We extend affinity propagation in a principled way to solve the…

Machine Learning · Computer Science 2012-02-20 Inmar Givoni , Clement Chung , Brendan J. Frey

We have analyzed the relations between the mutational pressure, recombination and selection pressure in the bit-string model with sexual reproduction. For specific sets of these parameters we have found three phase transitions with one…

Populations and Evolution · Quantitative Biology 2007-05-23 D. Stauffer , S. Cebrat

This contribution is concerned with mathematical models for the dynamics of the genetic composition of populations evolving under recombination. Recombination is the genetic mechanism by which two parent individuals create the mixed type of…

Populations and Evolution · Quantitative Biology 2011-01-12 Ellen Baake

The symbiotic branching model describes the dynamics of a spatial two-type population, where locally particles branch at a rate given by the frequency of the other type combined with nearest-neighbour migration. This model generalizes…

Probability · Mathematics 2021-07-01 Jochen Blath , Marcel Ortgiese

We study the evolution of allele frequencies in a large population where random mating is violated in a particular way that is related to recent works on speciation. Specifically, we consider non-random encounters in haploid organisms…

Populations and Evolution · Quantitative Biology 2013-09-05 David M. Schneider , Ayana B. Martins , Eduardo do Carmo , Marcus A. M. de Aguiar

We demonstrate the possibility of classifying causal systems into kinds that share a common structure without first constructing an explicit dynamical model or using prior knowledge of the system dynamics. The algorithmic ability to…

Machine Learning · Statistics 2016-12-16 Benjamin C. Jantzen

We study a family of selection-mutation models of a sexual population structured by a phenotypical trait. The main feature of these models is the asymmetric trait heredity or fecundity between the parents : we assume that each individual…

Analysis of PDEs · Mathematics 2022-04-11 Benoît Perthame , Martin Strugarek , Cécile Taing

In this paper, we extend Gary Becker's empirical analysis of the marriage market to same-sex couples. Becker's theory rationalizes the well-known phenomenon of homogamy among different-sex couples: individuals mate with their likes because…

General Economics · Economics 2021-02-15 Edoardo Ciscato , Alfred Galichon , Marion Goussé

Statistical inference about the speciation process has often been based on the isolation-with-migration (IM) model, especially when the research aim is to learn about the presence or absence of gene flow during divergence. The generalised…

Populations and Evolution · Quantitative Biology 2016-02-05 Rui J. Costa , Hilde Wilkinson-Herbots
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