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Many scientific problems involve data that is embedded in a space with periodic boundary conditions. This can for instance be related to an inherent cyclic or rotational symmetry in the data or a spatially extended periodicity. When…

Machine Learning · Computer Science 2025-10-08 Xander M. de Wit , Alessandro Gabbana

Clustering is a fundamental task in machine learning. One of the most successful and broadly used algorithms is DBSCAN, a density-based clustering algorithm. DBSCAN requires $\epsilon$-nearest neighbor graphs of the input dataset, which are…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-09-12 Youguang Chen , William Ruys , George Biros

Density-based clustering is the task of discovering high-density regions of entities (clusters) that are separated from each other by contiguous regions of low-density. DBSCAN is, arguably, the most popular density-based clustering…

Machine Learning · Computer Science 2018-11-20 Stiphen Chowdhury , Renato Cordeiro de Amorim

Clustering is a cornerstone of modern data analysis. Detecting clusters in exploratory data analyses (EDA) requires algorithms that make few assumptions about the data. Density-based clustering algorithms are particularly well-suited for…

Machine Learning · Computer Science 2026-02-03 Daniël Bot , Leland McInnes , Jan Aerts

Atom probe tomography is commonly used to study solute clustering and precipitation in materials. However, standard techniques, such as the density based spatial clustering applications with noise (DBSCAN) perform poorly with respect to…

Materials Science · Physics 2025-09-05 R S. Stroud , A. Al-Saffar , M. Carter , M P. Moody , S. Pedrazzini , M R. Wenman

DBSCAN has been widely used in density-based clustering algorithms. However, with the increasing demand for Multi-density clustering, previous traditional DSBCAN can not have good clustering results on Multi-density datasets. In order to…

Databases · Computer Science 2023-10-10 Ziqing Wang , Zhirong Ye , Yuyang Du , Yi Mao , Yanying Liu , Ziling Wu , Jun Wang

DBSCAN and OPTICS are powerful algorithms for identifying clusters of points in domains where few assumptions can be made about the structure of the data. In this paper, we leverage these strengths and introduce a new algorithm, LINSCAN,…

Machine Learning · Computer Science 2026-04-15 Andrew Dennehy , Xiaoyu Zou , Shabnam J. Semnani , Yuri Fialko , Alexander Cloninger

We present a new method to detect meteor showers using the Density-Based Spatial Clustering of Applications with Noise algorithm (DBSCAN; Ester et al. 1996). DBSCAN is a modern cluster detection algorithm that is well suited to the problem…

Earth and Planetary Astrophysics · Physics 2018-03-14 Glenn Sugar , Althea Moorhead , Peter Brown , Bill Cooke

DBSCAN, a well-known density-based clustering algorithm, has gained widespread popularity and usage due to its effectiveness in identifying clusters of arbitrary shapes and handling noisy data. However, it encounters challenges in producing…

Machine Learning · Computer Science 2025-05-09 Hao Peng , Xiang Huang , Shuo Sun , Ruitong Zhang , Philip S. Yu

Density-based clustering algorithms are widely used for discovering clusters in pattern recognition and machine learning since they can deal with non-hyperspherical clusters and are robustness to handle outliers. However, the runtime of…

Machine Learning · Computer Science 2022-07-07 Difei Cheng , Ruihang Xu , Bo Zhang , Ruinan Jin

Recent advancements in neutron and X-ray sources, instrumentation and data collection modes have significantly increased the experimental data size (which could easily contain 10$^{8}$ -- 10$^{10}$ data points), so that conventional…

Computer Vision and Pattern Recognition · Computer Science 2018-09-25 Yawei Hui , Yaohua Liu

Clustering is a fundamental unsupervised learning approach. Many clustering algorithms -- such as $k$-means -- rely on the euclidean distance as a similarity measure, which is often not the most relevant metric for high dimensional data…

Machine Learning · Computer Science 2019-10-22 Aude Genevay , Gabriel Dulac-Arnold , Jean-Philippe Vert

We present an accelerated algorithm for hierarchical density based clustering. Our new algorithm improves upon HDBSCAN*, which itself provided a significant qualitative improvement over the popular DBSCAN algorithm. The accelerated HDBSCAN*…

Machine Learning · Statistics 2018-12-20 Leland McInnes , John Healy

The Density Based Spatial Clustering of Applications with Noise (DBSCAN) is a topometric algorithm used to cluster spatial data that are affected by background noise. For the first time, we propose the use of this method for the detection…

Instrumentation and Methods for Astrophysics · Physics 2015-06-11 A. Tramacere , C. Vecchio

This paper presents a batch-wise density-based clustering approach for local outlier detection in massive-scale datasets. Unlike the well-known traditional algorithms, which assume that all the data is memory-resident, our proposed method…

Machine Learning · Computer Science 2021-07-06 Sayyed Ahmad Naghavi Nozad , Maryam Amir Haeri , Gianluigi Folino

DBSCAN* and HDBSCAN* are well established density based clustering algorithms. However, obtaining the clusters of very large datasets is infeasible, limiting their use in real world applications. By exploiting the geometry of Euclidean…

Machine Learning · Computer Science 2022-03-16 A. L. Garcia-Pulido , K. P. Samardzhiev

Clustering multidimensional points is a fundamental data mining task, with applications in many fields, such as astronomy, neuroscience, bioinformatics, and computer vision. The goal of clustering algorithms is to group similar objects…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-22 Yihao Huang , Shangdi Yu , Julian Shun

Cluster analysis plays a crucial role in database mining, and one of the most widely used algorithms in this field is DBSCAN. However, DBSCAN has several limitations, such as difficulty in handling high-dimensional large-scale data,…

Machine Learning · Computer Science 2024-04-30 Weibing Zhao

Clustering real world data often faced with curse of dimensionality, where real world data often consist of many dimensions. Multidimensional data clustering evaluation can be done through a density-based approach. Density approaches based…

Databases · Computer Science 2010-12-30 Rahmat Widia Sembiring , Jasni Mohamad Zain

DBSCAN is a fundamental density-based clustering technique that identifies any arbitrary shape of the clusters. However, it becomes infeasible while handling big data. On the other hand, centroid-based clustering is important for detecting…

Machine Learning · Computer Science 2023-10-12 Jayasree Saha , Jayanta Mukherjee