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We focus our attention on the link prediction problem for knowledge graphs, which is treated herein as a binary classification task on neural embeddings of the entities. By comparing, combining and extending different methodologies for link…

Artificial Intelligence · Computer Science 2018-07-30 Asan Agibetov , Matthias Samwald

Rule mining on knowledge graphs allows for explainable link prediction. Contrarily, embedding-based methods for link prediction are well known for their generalization capabilities, but their predictions are not interpretable. Several…

Artificial Intelligence · Computer Science 2024-06-17 N'Dah Jean Kouagou , Arif Yilmaz , Michel Dumontier , Axel-Cyrille Ngonga Ngomo

Embedding entities and relations into a continuous multi-dimensional vector space have become the dominant method for knowledge graph embedding in representation learning. However, most existing models ignore to represent hierarchical…

Artificial Intelligence · Computer Science 2019-09-12 Cunxiang Wang , Feiliang Ren , Zhichao Lin , Chenxv Zhao , Tian Xie , Yue Zhang

A widely used paradigm to improve the generalization performance of high-capacity neural models is through the addition of auxiliary unsupervised tasks during supervised training. Tasks such as similarity matching and input reconstruction…

Machine Learning · Computer Science 2022-01-19 Shivin Srivastava , Kenji Kawaguchi , Vaibhav Rajan

Discovery gene-disease links is important in biology and medicine areas, enabling disease identification and drug repurposing. Machine learning approaches accelerate this process by leveraging biological knowledge represented in ontologies…

Machine Learning · Computer Science 2025-04-14 Catarina Canastra , Cátia Pesquita

Link prediction is an open problem in the complex network, which attracts much research interest currently. However, little attention has been paid to the relation between network structure and the performance of prediction methods. In…

Social and Information Networks · Computer Science 2014-10-28 Xu Feng , Jichang Zhao , Ke Xu

Protein representation learning is a challenging task that aims to capture the structure and function of proteins from their amino acid sequences. Previous methods largely ignored the fact that not all amino acids are equally important for…

Machine Learning · Computer Science 2024-04-02 Ruijie Quan , Wenguan Wang , Fan Ma , Hehe Fan , Yi Yang

Embedding is a common technique for analyzing multi-dimensional data. However, the embedding projection cannot always form significant and interpretable visual structures that foreshadow underlying data patterns. We propose an approach that…

Human-Computer Interaction · Computer Science 2022-09-26 Jie Li , Chun-qi Zhou

Recently, link prediction algorithms based on neural embeddings have gained tremendous popularity in the Semantic Web community, and are extensively used for knowledge graph completion. While algorithmic advances have strongly focused on…

Artificial Intelligence · Computer Science 2020-08-31 Asan Agibetov , Matthias Samwald

We address the problem of communicating domain knowledge from a user to the designer of a clustering algorithm. We propose a protocol in which the user provides a clustering of a relatively small random sample of a data set. The algorithm…

Machine Learning · Statistics 2015-06-22 Hassan Ashtiani , Shai Ben-David

Over the past years, embedding learning on networks has shown tremendous results in link prediction tasks for complex systems, with a wide range of real-life applications. Learning a representation for each node in a knowledge graph allows…

Machine Learning · Computer Science 2026-02-03 Orell Trautmann , Olaf Wolkenhauer , Clémence Réda

Representation learning is a fundamental building block for analyzing entities in a database. While the existing embedding learning methods are effective in various data mining problems, their applicability is often limited because these…

Machine Learning · Computer Science 2020-09-24 Chin-Chia Michael Yeh , Dhruv Gelda , Zhongfang Zhuang , Yan Zheng , Liang Gou , Wei Zhang

The simultaneous application of multiple treatments is increasingly common in many fields, such as healthcare and marketing. In such scenarios, it is important to estimate the single treatment effects and the interaction treatment effects…

Methodology · Statistics 2025-11-14 Yuki Murakami , Takumi Hattori , Kohsuke Kubota

Representation learning is the first step in automating tasks such as research paper recommendation, classification, and retrieval. Due to the accelerating rate of research publication, together with the recognised benefits of…

Digital Libraries · Computer Science 2023-03-22 Eoghan Cunningham , Derek Greene

Knowledge graph embedding is a representation learning technique that projects entities and relations in a knowledge graph to continuous vector spaces. Embeddings have gained a lot of uptake and have been heavily used in link prediction and…

Artificial Intelligence · Computer Science 2022-07-14 Jan Portisch , Heiko Paulheim

Knowledge graphs are useful for many artificial intelligence tasks but often have missing data. Hence, a method for completing knowledge graphs is required. Existing approaches include embedding models, the Path Ranking Algorithm, and rule…

Artificial Intelligence · Computer Science 2019-09-11 Takuma Ebisu , Ryutaro Ichise

Representation learning aims to extract meaningful lower-dimensional embeddings from data, known as representations. Despite its widespread application, there is no established definition of a ``good'' representation. Typically, the…

Machine Learning · Computer Science 2024-12-05 Mahalakshmi Sabanayagam , Omar Al-Dabooni , Pascal Esser

Consensus clustering fuses diverse basic partitions (i.e., clustering results obtained from conventional clustering methods) into an integrated one, which has attracted increasing attention in both academic and industrial areas due to its…

Machine Learning · Computer Science 2019-06-04 Hongfu Liu , Zhiqiang Tao , Zhengming Ding

Term clustering is important in biomedical knowledge graph construction. Using similarities between terms embedding is helpful for term clustering. State-of-the-art term embeddings leverage pretrained language models to encode terms, and…

Computation and Language · Computer Science 2022-04-04 Sihang Zeng , Zheng Yuan , Sheng Yu

Link prediction in a graph is the problem of detecting the missing links that would be formed in the near future. Using a graph representation of the data, we can convert the problem of classification to the problem of link prediction which…

Machine Learning · Computer Science 2018-10-02 Seyed Amin Fadaee , Maryam Amir Haeri
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