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Biomedical text mining is becoming increasingly important as the number of biomedical documents rapidly grows. With the progress in natural language processing (NLP), extracting valuable information from biomedical literature has gained…

Computation and Language · Computer Science 2019-10-21 Jinhyuk Lee , Wonjin Yoon , Sungdong Kim , Donghyeon Kim , Sunkyu Kim , Chan Ho So , Jaewoo Kang

While recent research on natural language inference has considerably benefited from large annotated datasets, the amount of inference-related knowledge (including commonsense) provided in the annotated data is still rather limited. There…

Computation and Language · Computer Science 2021-09-10 Xiaoyu Yang , Xiaodan Zhu , Zhan Shi , Tianda Li

Pre-trained language models like BERT achieve superior performances in various NLP tasks without explicit consideration of syntactic information. Meanwhile, syntactic information has been proved to be crucial for the success of NLP…

Computation and Language · Computer Science 2021-03-09 Jiangang Bai , Yujing Wang , Yiren Chen , Yaming Yang , Jing Bai , Jing Yu , Yunhai Tong

Given the prevalence of pre-trained contextualized representations in today's NLP, there have been many efforts to understand what information they contain, and why they seem to be universally successful. The most common approach to use…

Computation and Language · Computer Science 2022-03-17 Yichu Zhou , Vivek Srikumar

Recent advances in natural language processing (NLP) have been driven bypretrained language models like BERT, RoBERTa, T5, and GPT. Thesemodels excel at understanding complex texts, but biomedical literature, withits domain-specific…

Computation and Language · Computer Science 2025-07-28 K. Sahit Reddy , N. Ragavenderan , Vasanth K. , Ganesh N. Naik , Vishalakshi Prabhu , Nagaraja G. S

Large pre-trained language models help to achieve state of the art on a variety of natural language processing (NLP) tasks, nevertheless, they still suffer from forgetting when incrementally learning a sequence of tasks. To alleviate this…

Computation and Language · Computer Science 2023-03-03 Mingxu Tao , Yansong Feng , Dongyan Zhao

Natural language processing (NLP) in the medical domain can underperform in real-world applications involving small datasets in a non-English language with few labeled samples and imbalanced classes. There is yet no consensus on how to…

Computation and Language · Computer Science 2024-10-01 Vincent Beliveau , Helene Kaas , Martin Prener , Claes N. Ladefoged , Desmond Elliott , Gitte M. Knudsen , Lars H. Pinborg , Melanie Ganz

The introduction of the Transformer neural network, along with techniques like self-supervised pre-training and transfer learning, has paved the way for advanced models like BERT. Despite BERT's impressive performance, opportunities for…

Computation and Language · Computer Science 2024-07-02 Farnaz Zeidi , Mehmet Fatih Amasyali , Çiğdem Erol

Natural Language Processing (NLP) techniques can be applied to help with the diagnosis of medical conditions such as depression, using a collection of a person's utterances. Depression is a serious medical illness that can have adverse…

Computation and Language · Computer Science 2022-06-17 Priyam Basu , Tiasa Singha Roy , Rakshit Naidu , Zumrut Muftuoglu , Sahib Singh , Fatemehsadat Mireshghallah

Contextual pretrained language models, such as BERT (Devlin et al., 2019), have made significant breakthrough in various NLP tasks by training on large scale of unlabeled text re-sources.Financial sector also accumulates large amount of…

Computation and Language · Computer Science 2020-07-10 Yi Yang , Mark Christopher Siy UY , Allen Huang

Natural language processing (NLP) of clinical trial documents can be useful in new trial design. Here we identify entity types relevant to clinical trial design and propose a framework called CT-BERT for information extraction from clinical…

Quantitative Methods · Quantitative Biology 2021-10-20 Xiong Liu , Greg L. Hersch , Iya Khalil , Murthy Devarakonda

Clinical notes contain an extensive record of a patient's health status, such as smoking status or the presence of heart conditions. However, this detail is not replicated within the structured data of electronic health systems.…

Computation and Language · Computer Science 2020-09-18 Andriy Mulyar , Elliot Schumacher , Masoud Rouhizadeh , Mark Dredze

Fine-tuning Large Language Models (LLMs) is now a common approach for text classification in a wide range of applications. When labeled documents are scarce, active learning helps save annotation efforts but requires retraining of massive…

Machine Learning · Computer Science 2024-02-27 Artem Vysogorets , Achintya Gopal

Recent progress in pretraining language models on large textual corpora led to a surge of improvements for downstream NLP tasks. Whilst learning linguistic knowledge, these models may also be storing relational knowledge present in the…

Computation and Language · Computer Science 2019-09-05 Fabio Petroni , Tim Rocktäschel , Patrick Lewis , Anton Bakhtin , Yuxiang Wu , Alexander H. Miller , Sebastian Riedel

Fine-tuning language models, such as BERT, on domain specific corpora has proven to be valuable in domains like scientific papers and biomedical text. In this paper, we show that fine-tuning BERT on legal documents similarly provides…

Computation and Language · Computer Science 2019-11-04 Emad Elwany , Dave Moore , Gaurav Oberoi

Artificial intelligence and machine learning have significantly bolstered the technological world. This paper explores the potential of transfer learning in natural language processing focusing mainly on sentiment analysis. The models…

Computation and Language · Computer Science 2023-11-29 Aman Yadav , Abhishek Vichare

Obtaining text datasets with semantic annotations is an effortful process, yet crucial for supervised training in natural language processsing (NLP). In general, developing and applying new NLP pipelines in domain-specific contexts for…

Computation and Language · Computer Science 2022-09-01 Johann Frei , Frank Kramer

The BERT model has arisen as a popular state-of-the-art machine learning model in the recent years that is able to cope with multiple NLP tasks such as supervised text classification without human supervision. Its flexibility to cope with…

Computation and Language · Computer Science 2023-04-26 Santiago González-Carvajal , Eduardo C. Garrido-Merchán

Emerging Large Language Models (LLMs) like GPT-4 have revolutionized Natural Language Processing (NLP), showing potential in traditional tasks such as Named Entity Recognition (NER). Our study explores a three-phase training strategy that…

Computation and Language · Computer Science 2024-03-26 Yining Huang , Keke Tang , Meilian Chen

Time is an important aspect of documents and is used in a range of NLP and IR tasks. In this work, we investigate methods for incorporating temporal information during pre-training to further improve the performance on time-related tasks.…

Computation and Language · Computer Science 2023-04-28 Jiexin Wang , Adam Jatowt , Masatoshi Yoshikawa , Yi Cai