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A determinant property of the structure of a biological network is the distribution of local connectivity patterns, i.e., network motifs. In this work, a method for creating directed, unweighted networks while promoting a certain…

Social and Information Networks · Computer Science 2016-07-29 Tuomo Mäki-Marttunen

This document is an informal bibliography of the papers dealing with distributed approximation algorithms. A classic setting for such algorithms is bounded degree graphs, but there is a whole set of techniques that have been developed for…

Data Structures and Algorithms · Computer Science 2023-11-10 Laurent Feuilloley

The Artificial Benchmark for Community Detection (ABCD) graph is a recently introduced random graph model with community structure and power-law distribution for both degrees and community sizes. The model generates graphs with similar…

Social and Information Networks · Computer Science 2023-06-14 Bogumił Kamiński , Paweł Prałat , François Théberge

Gibbs random fields (GRF) are polymorphous statistical models that can be used to analyse different types of dependence, in particular for spatially correlated data. However, when those models are faced with the challenge of selecting a…

In recommender systems, user-item interactions can be modeled as a bipartite graph, where user and item nodes are connected by undirected edges. This graph-based view has motivated the rapid adoption of graph neural networks (GNNs), which…

The availability of large scale streaming network data has reinforced the ubiquity of power-law distributions in observations and enabled precision measurements of the distribution parameters. The increased accuracy of these measurements…

Physics and Society · Physics 2021-08-23 Pat Devlin , Jeremy Kepner , Ashley Luo , Erin Meger

Molecule generation is central to a variety of applications. Current attention has been paid to approaching the generation task as subgraph prediction and assembling. Nevertheless, these methods usually rely on hand-crafted or external…

Machine Learning · Computer Science 2022-12-20 Xiangzhe Kong , Wenbing Huang , Zhixing Tan , Yang Liu

Preferential attachment is an appealing edge generating mechanism for modeling social networks. It provides both an intuitive description of network growth and an explanation for the observed power laws in degree distributions. However,…

Methodology · Statistics 2017-12-21 Phyllis Wan , Tiandong Wang , Richard A. Davis , Sidney I. Resnick

We propose algorithms for construction and random generation of hypergraphs without loops and with prescribed degree and dimension sequences. The objective is to provide a starting point for as well as an alternative to Markov chain Monte…

Data Structures and Algorithms · Computer Science 2020-04-14 Naheed Anjum Arafat , Debabrota Basu , Laurent Decreusefond , Stephane Bressan

The knowledge discovery algorithms have become ineffective at the abundance of data and the need for fast algorithms or optimizing methods is required. To address this limitation, the objective of this work is to adapt a new method for…

Databases · Computer Science 2013-12-18 Thabet Slimani

Relevance and importance are the main factors when humans build network connections. We propose an evolutionary network model based on preferential attachment(PA) considering these factors. We analyze and compute several important features…

Physics and Society · Physics 2014-12-25 Weituo Zhang , Chjan Lim

Probabilistic generative models of graphs are important tools that enable representation and sampling. Many recent works have created probabilistic models of graphs that are capable of representing not only entity interactions but also…

Machine Learning · Computer Science 2023-08-09 Pablo Robles-Granda , Katherine Tsai , Oluwasanmi Koyejo

Iterative Proportional Fitting (IPF), combined with EM, is commonly used as an algorithm for likelihood maximization in undirected graphical models. In this paper, we present two iterative algorithms that generalize upon IPF. The first one…

Machine Learning · Computer Science 2013-01-07 Wim Wiegerinck , Tom Heskes

In principle, the rules of links formation of a network model can be considered as a kind of link prediction algorithm. By revisiting the preferential attachment mechanism for generating a scale-free network, here we propose a class of…

Physics and Society · Physics 2012-11-09 Ke Hu , Ju Xiang , Wanchun Yang , Xiaoke Xu , Yi Tang

We describe a new method for the random sampling of connected networks with a specified degree sequence. We consider both the case of simple graphs and that of loopless multigraphs. The constraints of fixed degrees and of connectedness are…

Physics and Society · Physics 2020-12-03 Szabolcs Horvát , Carl D. Modes

Random graph (RG) models play a central role in the complex networks analysis. They help to understand, control, and predict phenomena occurring, for instance, in social networks, biological networks, the Internet, etc. Despite a large…

Social and Information Networks · Computer Science 2024-03-22 Mikhail Drobyshevskiy , Denis Turdakov

We introduce a family of one-dimensional geometric growth models, constructed iteratively by locally optimizing the tradeoffs between two competing metrics, and show that this family is equivalent to a family of preferential attachment…

Disordered Systems and Neural Networks · Physics 2007-05-23 N. Berger , C. Borgs , J. T. Chayes , R. M. D'Souza , R. D. Kleinberg

The Boltzmann model for the random generation of "decomposable" combinatorial structures is a set of techniques that allows for efficient random sampling algorithms for a large class of families of discrete objects. The usual requirement of…

Data Structures and Algorithms · Computer Science 2011-12-23 Philippe Duchon

In probabilistic modelling, joint distributions are often of more interest than their marginals, but the standard composition of stochastic channels is defined by marginalization. Last year at ACT, the notion of 'copy-composition' was…

Category Theory · Mathematics 2025-09-26 Toby St Clere Smithe

The monography examines the problem of constructing a group of automorphisms of a graph. A graph automorphism is a mapping of a set of vertices onto itself that preserves adjacency. The set of such automorphisms forms a vertex group of a…

History and Overview · Mathematics 2024-07-18 Sergey Kurapov , Maxim Davidovsky
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