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The UK Biobank Imaging Study has acquired medical scans of more than 40,000 volunteer participants. The resulting wealth of anatomical information has been made available for research, together with extensive metadata including measurements…

Image and Video Processing · Electrical Eng. & Systems 2020-07-02 Taro Langner , Robin Strand , Håkan Ahlström , Joel Kullberg

Large-scale medical studies such as the UK Biobank examine thousands of volunteer participants with medical imaging techniques. Combined with the vast amount of collected metadata, anatomical information from these images has the potential…

Image and Video Processing · Electrical Eng. & Systems 2021-05-18 Taro Langner , Robin Strand , Håkan Ahlström , Joel Kullberg

Along with rich health-related metadata, medical images have been acquired for over 40,000 male and female UK Biobank participants, aged 44-82, since 2014. Phenotypes derived from these images, such as measurements of body composition from…

Image and Video Processing · Electrical Eng. & Systems 2021-09-16 Taro Langner , Fredrik K. Gustafsson , Benny Avelin , Robin Strand , Håkan Ahlström , Joel Kullberg

UK Biobank (UKB) conducts large-scale examinations of more than half a million volunteers, collecting health-related information on genetics, lifestyle, blood biochemistry, and more. Medical imaging of 100,000 subjects, with 70,000…

Image and Video Processing · Electrical Eng. & Systems 2021-09-15 Taro Langner , Andrés Martínez Mora , Robin Strand , Håkan Ahlström , Joel Kullberg

The UK Biobank is collecting extensive data on health-related characteristics of over half a million volunteers. The biological samples of blood and urine can provide valuable insight on kidney function, with important links to…

Image and Video Processing · Electrical Eng. & Systems 2020-06-15 Taro Langner , Andreas Östling , Lukas Maldonis , Albin Karlsson , Daniel Olmo , Dag Lindgren , Andreas Wallin , Lowe Lundin , Robin Strand , Håkan Ahlström , Joel Kullberg

Convolutional neural network (CNN) based segmentation methods provide an efficient and automated way for clinicians to assess the structure and function of the heart in cardiac MR images. While CNNs can generally perform the segmentation…

Brain morphometry from magnetic resonance imaging (MRI) is a consolidated biomarker for many neurodegenerative diseases. Recent advances in this domain indicate that deep convolutional neural networks can infer morphometric measurements…

Image and Video Processing · Electrical Eng. & Systems 2020-09-09 Rodrigo Santa Cruz , Léo Lebrat , Pierrick Bourgeat , Vincent Doré , Jason Dowling , Jurgen Fripp , Clinton Fookes , Olivier Salvado

An end-to-end image analysis pipeline is presented for the abdominal MRI protocol used in the UK Biobank on the first 38,971 participants. Emphasis is on the processing steps necessary to ensure a high-level of data quality and consistency…

Image and Video Processing · Electrical Eng. & Systems 2020-07-17 Nicolas Basty , Yi Liu , Madeleine Cule , E. Louise Thomas , Jimmy D. Bell , Brandon Whitcher

Predicting future brain state from a baseline magnetic resonance image (MRI) is a central challenge in neuroimaging and has important implications for studying neurodegenerative diseases such as Alzheimer's disease (AD). Most existing…

Computer Vision and Pattern Recognition · Computer Science 2026-05-28 Ali Farki , Elaheh Moradi , Deepika Koundal , Jussi Tohka

Background: The trend towards large-scale studies including population imaging poses new challenges in terms of quality control (QC). This is a particular issue when automatic processing tools, e.g. image segmentation methods, are employed…

Magnetic resonance imaging (MRI) offers superior soft tissue contrast and is widely used in biomedicine. However, conventional MRI is not quantitative, which presents a bottleneck in image analysis and digital healthcare. Typically,…

Magnetic Resonance Imaging (MRI) is an essential diagnostic tool for assessing knee injuries. However, manual interpretation of MRI slices remains time-consuming and prone to inter-observer variability. This study presents a systematic…

Image and Video Processing · Electrical Eng. & Systems 2025-08-22 Justin Yiu , Kushank Arora , Daniel Steinberg , Rohit Ghiya

Magnetic Resonance Imaging (MRI) is a principal diagnostic approach used in the field of radiology to create images of the anatomical and physiological structure of patients. MRI is the prevalent medical imaging practice to find…

Computer Vision and Pattern Recognition · Computer Science 2021-06-16 Yusuf Brima , Mossadek Hossain Kamal Tushar , Upama Kabir , Tariqul Islam

The availability of large scale databases containing imaging and non-imaging data, such as the UK Biobank, represents an opportunity to improve our understanding of healthy and diseased bodily function. Cardiac motion atlases provide a…

Computer Vision and Pattern Recognition · Computer Science 2021-06-24 Esther Puyol-Anton , Bram Ruijsink , Helene Langet , Mathieu De Craene , Paolo Piro , Julia A. Schnabel , Andrew P. King

Self-diagnostic image-based methods for healthy weight monitoring is gaining increased interest following the alarming trend of obesity. Only a handful of academic studies exist that investigate AI-based methods for Body Mass Index (BMI)…

Computer Vision and Pattern Recognition · Computer Science 2020-10-16 Hera Siddiqui , Ajita Rattani , Dakshina Ranjan Kisku , Tanner Dean

NeuroNet is a deep convolutional neural network mimicking multiple popular and state-of-the-art brain segmentation tools including FSL, SPM, and MALPEM. The network is trained on 5,000 T1-weighted brain MRI scans from the UK Biobank Imaging…

Computer Vision and Pattern Recognition · Computer Science 2018-06-13 Martin Rajchl , Nick Pawlowski , Daniel Rueckert , Paul M. Matthews , Ben Glocker

The exploitation of large-scale population data has the potential to improve healthcare by discovering and understanding patterns and trends within this data. To enable high throughput analysis of cardiac imaging data automatically, a…

Image and Video Processing · Electrical Eng. & Systems 2019-01-14 Rahman Attar , Marco Pereanez , Ali Gooya , Xenia Alba , Le Zhang , Stefan K. Piechnik , Stefan Neubauer , Steffen E. Petersen , Alejandro F. Frangi

Objectives: To present a publicly available deep learning-based torso segmentation model that provides comprehensive voxel-wise coverage, including delineations that extend to the boundaries of anatomical compartments. Materials and…

Large prospective epidemiological studies acquire cardiovascular magnetic resonance (CMR) images for pre-symptomatic populations and follow these over time. To support this approach, fully automatic large-scale 3D analysis is essential. In…

Image and Video Processing · Electrical Eng. & Systems 2019-07-04 Rahman Attar , Marco Pereanez , Christopher Bowles , Stefan K. Piechnik , Stefan Neubauer , Steffen E. Petersen , Alejandro F. Frangi
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