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Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action…

Machine Learning · Computer Science 2021-01-06 Haoyan Xu , Ziheng Duan , Jie Feng , Runjian Chen , Qianru Zhang , Zhongbin Xu , Yueyang Wang

Homomorphism is a key mapping technique between graphs that preserves their structure. Given a graph and a pattern, the subgraph homomorphism problem involves finding a mapping from the pattern to the graph, ensuring that adjacent vertices…

Artificial Intelligence · Computer Science 2025-12-18 Shuyang Guo , Wenjin Xie , Ping Lu , Ting Deng , Richong Zhang , Jianxin Li , Xiangping Huang , Zhongyi Liu

When students write programs, their program structure provides insight into their learning process. However, analyzing program structure by hand is time-consuming, and teachers need better tools for computer-assisted exploration of student…

Computers and Society · Computer Science 2021-01-26 Will Crichton , Georgia Gabriela Sampaio , Pat Hanrahan

Graph isomorphism is a problem for which there is no known polynomial-time solution. Nevertheless, assessing (dis)similarity between two or more networks is a key task in many areas, such as image recognition, biology, chemistry, computer…

Computation · Statistics 2022-06-28 Pierre Miasnikof , Alexander Y. Shestopaloff , Cristián Bravo , Yuri Lawryshyn

Graph filters that transform prior node values to posterior scores via edge propagation often support graph mining tasks affecting humans, such as recommendation and ranking. Thus, it is important to make them fair in terms of satisfying…

Machine Learning · Computer Science 2023-03-17 Emmanouil Krasanakis , Symeon Papadopoulos

Dataflow matrix machines are a powerful generalization of recurrent neural networks. They work with multiple types of arbitrary linear streams, multiple types of powerful neurons, and allow to incorporate higher-order constructions. We…

Neural and Evolutionary Computing · Computer Science 2018-05-29 Michael Bukatin , Steve Matthews , Andrey Radul

The design of neural architectures for structured objects is typically guided by experimental insights rather than a formal process. In this work, we appeal to kernels over combinatorial structures, such as sequences and graphs, to derive…

Neural and Evolutionary Computing · Computer Science 2017-10-31 Tao Lei , Wengong Jin , Regina Barzilay , Tommi Jaakkola

Graphs, and graph transformation systems, are used in many areas within Computer Science: to represent data structures and algorithms, to define computation models, as a general modelling tool to study complex systems, etc. Research in term…

Symbolic Computation · Computer Science 2021-02-04 Patrick Bahr

One of the big challenges in program obfuscation consists in modifying not only the program's straight-line code (SLC) but also the program's control flow graph (CFG). Indeed, if only SLC is modified, the program's CFG can be extracted and…

Cryptography and Security · Computer Science 2017-09-26 Rémi Géraud , Mirko Koscina , Paul Lenczner , David Naccache , David Saulpic

Detecting buffer overruns from a source code is one of the most common and yet challenging tasks in program analysis. Current approaches have mainly relied on rigid rules and handcrafted features devised by a few experts, limiting…

Software Engineering · Computer Science 2017-03-08 Min-je Choi , Sehun Jeong , Hakjoo Oh , Jaegul Choo

Graph matching consists of aligning the vertices of two unlabeled graphs in order to maximize the shared structure across networks; when the graphs are unipartite, this is commonly formulated as minimizing their edge disagreements. In this…

Machine Learning · Statistics 2021-04-13 Jesús Arroyo , Carey E. Priebe , Vince Lyzinski

Graph classification benchmarks, vital for assessing and developing graph neural networks (GNNs), have recently been scrutinized, as simple methods like MLPs have demonstrated comparable performance. This leads to an important question: Do…

Machine Learning · Computer Science 2024-08-14 Zhengdao Li , Yong Cao , Kefan Shuai , Yiming Miao , Kai Hwang

Data processing systems impose multiple views on data as it is processed by the system. These views include spreadsheets, databases, matrices, and graphs. Associative arrays unify and simplify these different approaches into a common…

Databases · Computer Science 2017-01-03 Karia Dibert , Hayden Jansen , Jeremy Kepner

Modern machine learning systems represent their computations as dataflow graphs. The increasingly complex neural network architectures crave for more powerful yet efficient programming abstractions. In this paper we propose an efficient…

Programming Languages · Computer Science 2024-10-29 Kelly Kostopoulou , Angelos Charalambidis , Panos Rondogiannis

We precisely characterize the expressivity of computable Recurrent Graph Neural Networks (recurrent GNNs). We prove that recurrent GNNs with finite-precision parameters, sum aggregation, and ReLU activation, can compute any graph algorithm…

Machine Learning · Computer Science 2026-03-17 Eran Rosenbluth , Martin Grohe

A graph generative model defines a distribution over graphs. One type of generative model is constructed by autoregressive neural networks, which sequentially add nodes and edges to generate a graph. However, the likelihood of a graph under…

Machine Learning · Statistics 2021-06-15 Xiaohui Chen , Xu Han , Jiajing Hu , Francisco J. R. Ruiz , Liping Liu

We consider the following common network analysis problem: given a degree sequence $\mathbf{d} = (d_1, \dots, d_n) \in \mathbb N^n$ return a uniform sample from the ensemble of all simple graphs with matching degrees. In practice, the…

Data Structures and Algorithms · Computer Science 2021-10-29 Daniel Allendorf , Ulrich Meyer , Manuel Penschuck , Hung Tran , Nick Wormald

Graph-structured data is ubiquitous in practice and often processed using graph neural networks (GNNs). With the adoption of recent laws ensuring the ``right to be forgotten'', the problem of graph data removal has become of significant…

Machine Learning · Computer Science 2022-11-01 Eli Chien , Chao Pan , Olgica Milenkovic

Graph Neural Networks (GNNs) have attracted increasing attention in recent years and have achieved excellent performance in semi-supervised node classification tasks. The success of most GNNs relies on one fundamental assumption, i.e., the…

Machine Learning · Computer Science 2024-12-03 Junchao Lin , Yuan Wan , Jingwen Xu , Xingchen Qi

Many interesting program properties involve the execution of multiple programs, including observational equivalence, noninterference, co-termination, monotonicity, and idempotency. One strategy for verifying such relational properties is to…

Programming Languages · Computer Science 2025-03-13 Robert Dickerson , Prasita Mukherjee , Benjamin Delaware