Related papers: On Extensions of Maximal Repeats in Compressed Str…
We present a few classes of synchronizing automata exhibiting certain extremal properties with regard to synchronization. The first is a series of automata with subsets whose shortest extending words are of length $\varTheta(n^2)$, where…
A gapped repeat is a factor of the form $uvu$ where $u$ and $v$ are nonempty words. The period of the gapped repeat is defined as $|u|+|v|$. The gapped repeat is maximal if it cannot be extended to the left or to the right by at least one…
We introduce Flashback, a reversible string decomposition that repeatedly peels the maximal leading and trailing character runs from a sentinel-wrapped input, recording each pair as one bilateral token. Decomposition and reconstruction both…
Motivated by mass-spectrometry protein sequencing, we consider a simply-stated problem of reconstructing a string from the multiset of its substring compositions. We show that all strings of length 7, one less than a prime, or one less than…
Burrows-Wheeler transform (BWT) is an invertible text transformation that, given a text $T$ of length $n$, permutes its symbols according to the lexicographic order of suffixes of $T$. BWT is one of the most heavily studied algorithms in…
It is known that the exact form of the Burrows-Wheeler-Transform (BWT) of a string collection depends, in most implementations, on the input order of the strings in the collection. Reordering strings of an input collection affects the…
Given a set of pattern strings $\mathcal{P}=\{P_1, P_2,\ldots P_k\}$ and a text string $S$, the classic dictionary matching problem is to report all occurrences of each pattern in $S$. We study the dictionary problem in the compressed…
The Burrows-Wheeler Transform (BWT) is a string transformation technique widely used in areas such as bioinformatics and file compression. Many applications combine a run-length encoding (RLE) with the BWT in a way which preserves the…
Shannon's entropy is a definitive lower bound for statistical compression. Unfortunately, no such clear measure exists for the compressibility of repetitive strings. Thus, ad hoc measures are employed to estimate the repetitiveness of…
A two-dimensional string is simply a two-dimensional array. We continue the study of the combinatorial properties of repetitions in such strings over the binary alphabet, namely the number of distinct tandems, distinct quartics, and runs.…
For $\alpha\geq 1$, an $\alpha$-gapped repeat in a word $w$ is a factor $uvu$ of $w$ such that $|uv|\leq \alpha |u|$; the two factors $u$ in such a repeat are called arms, while the factor $v$ is called gap. Such a repeat is called maximal…
A maximal repetition, or run, in a string, is a maximal periodic substring whose smallest period is at most half the length of the substring. In this paper, we consider runs that correspond to a path on a trie, or in other words, on a…
The exact localization result for the expectation value of the $1\over 2$ BPS circular Wilson loop in ${\cal N}=4$ SYM theory is given in the planar limit by the famous Bessel function expression: $\langle W\rangle = {2N\over \sqrt \lambda…
We characterize the clustering of a word under the Burrows-Wheeler transform in terms of the resolution of a bounded number of bispecial factors belonging to the language generated by all its powers. We use this criterion to compute, in…
We study long $r$-twins in random words and permutations. Motivated by questions posed in works of Dudek-Grytczuk-Ruci\'nski, we obtain the following. For a uniform word in $[k]^n$ we prove sharp one-sided tail bounds showing that the…
Recently, a short and elegant proof was presented showing that a binary word of length $n$ contains at most $n-3$ runs. Here we show, using the same technique and a computer search, that the number of runs in a binary word of length $n$ is…
A run is a maximal occurrence of a repetition $v$ with a period $p$ such that $2p \le |v|$. The maximal number of runs in a string of length $n$ was studied by several authors and it is known to be between $0.944 n$ and $1.029 n$. We…
Introduced about thirty years ago in the field of Data Compression, the Burrows-Wheeler Transform (BWT) is a string transformation that, besides being a booster of the performance of memoryless compressors, plays a fundamental role in the…
Let $A_{s,k}(m)$ be the maximum number of distinct letters in any sequence which can be partitioned into $m$ contiguous blocks of pairwise distinct letters, has at least $k$ occurrences of every letter, and has no subsequence forming an…
Massive type IIA supergravity admits a warped AdS_6 x S^4 vacuum solution, which is expected to be dual to an N=2, D=5 super-conformal Yang-Mills theory. We study solutions for strings rotating or spinning in this background. The warp…