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Related papers: On Contamination of Symbolic Datasets

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Next-generation sequencing (NGS) is a key technique for studying the DNA and RNA of organisms. However, identifying quality problems in NGS data across different experimental settings remains challenging. To develop automated…

This paper studies two problems that are motivated by the novel recent approach of composite DNA that takes advantage of the DNA synthesis property which generates a huge number of copies for every synthesized strand. Under this paradigm,…

Information Theory · Computer Science 2025-05-15 Tomer Cohen , Eitan Yaakobi

We consider a problem of data integration. Consider determining which genes affect a disease. The genes, which we call predictor objects, can be measured in different experiments on the same individual. We address the question of finding…

Machine Learning · Statistics 2016-10-04 Xin Gao , Raymond J. Carroll

The methylation of DNA regulates gene expression. On cell division the methylation state of the DNA is typically inherited from parent to daughter cells. While the chemical bond between the methyl group and the DNA is very strong, changes…

Populations and Evolution · Quantitative Biology 2012-10-05 Sean P Stromberg

Transfer learning is devised to leverage knowledge from pre-trained models to solve new tasks with limited data and computational resources. Meanwhile, dataset distillation has emerged to synthesize a compact dataset that preserves critical…

Cryptography and Security · Computer Science 2026-03-06 Yuchen Shi , Huajie Chen , Heng Xu , Zhiquan Liu , Jialiang Shen , Chi Liu , Shuai Zhou , Tianqing Zhu , Wanlei Zhou

In this position paper, we argue that the classical evaluation on Natural Language Processing (NLP) tasks using annotated benchmarks is in trouble. The worst kind of data contamination happens when a Large Language Model (LLM) is trained on…

Computation and Language · Computer Science 2023-10-30 Oscar Sainz , Jon Ander Campos , Iker García-Ferrero , Julen Etxaniz , Oier Lopez de Lacalle , Eneko Agirre

Classical semiparametric inference with missing outcome data is not robust to contamination of the observed data and a single observation can have arbitrarily large influence on estimation of a parameter of interest. This sensitivity is…

Methodology · Statistics 2021-03-02 Eva Cantoni , Xavier de Luna

Our world is ambiguous and this is reflected in the data we use to train our algorithms. This is particularly true when we try to model natural processes where collected data is affected by noisy measurements and differences in measurement…

Machine Learning · Computer Science 2023-07-19 Jörg K. H. Franke , Frederic Runge , Frank Hutter

Surveys are commonly used to facilitate research in epidemiology, health, and the social and behavioral sciences. Often, these surveys are not simple random samples, and respondents are given weights reflecting their probability of…

Methodology · Statistics 2024-08-20 Adway S. Wadekar , Jerome P. Reiter

Reconciling symbolic and distributed representations is a crucial challenge that can potentially resolve the limitations of current deep learning. Remarkable advances in this direction have been achieved recently via generative…

Machine Learning · Computer Science 2021-02-09 Jindong Jiang , Sungjin Ahn

DNA methylation (DNAme) is a critical component of the epigenetic regulatory machinery and aberrations in DNAme patterns occur in many diseases, such as cancer. Mapping and understanding DNAme profiles offers considerable promise for…

Benefit from large-scale training datasets, deep Convolutional Neural Networks(CNNs) have achieved impressive results in face recognition(FR). However, tremendous scale of datasets inevitably lead to noisy data, which obviously reduce the…

Computer Vision and Pattern Recognition · Computer Science 2019-03-27 Wei Hu , Yangyu Huang , Fan Zhang , Ruirui Li

Probabilistic models analyze data by relying on a set of assumptions. Data that exhibit deviations from these assumptions can undermine inference and prediction quality. Robust models offer protection against mismatch between a model's…

Machine Learning · Statistics 2018-06-20 Yixin Wang , Alp Kucukelbir , David M. Blei

We present a simple algorithm for identifying and correcting real-valued noisy labels from a mixture of clean and corrupted sample points using Gaussian process regression. A heteroscedastic noise model is employed, in which additive…

Machine Learning · Computer Science 2021-03-30 Yu-Hang Tang , Yuanran Zhu , Wibe A. de Jong

Prototypical examples that best summarizes and compactly represents an underlying complex data distribution communicate meaningful insights to humans in domains where simple explanations are hard to extract. In this paper we present…

Machine Learning · Statistics 2019-08-13 Karthik S. Gurumoorthy , Amit Dhurandhar , Guillermo Cecchi , Charu Aggarwal

Bayesian neural networks (BNNs) promise improved generalization under covariate shift by providing principled probabilistic representations of epistemic uncertainty. However, weight-based BNNs often struggle with high computational…

Machine Learning · Statistics 2022-06-13 Trung Trinh , Markus Heinonen , Luigi Acerbi , Samuel Kaski

Large-scale datasets possessing clean label annotations are crucial for training Convolutional Neural Networks (CNNs). However, labeling large-scale data can be very costly and error-prone, and even high-quality datasets are likely to…

Computer Vision and Pattern Recognition · Computer Science 2018-04-03 Yisen Wang , Weiyang Liu , Xingjun Ma , James Bailey , Hongyuan Zha , Le Song , Shu-Tao Xia

Generative adversarial networks (GANs) offer an effective solution to the image-to-image translation problem, thereby allowing for new possibilities in medical imaging. They can translate images from one imaging modality to another at a low…

Computer Vision and Pattern Recognition · Computer Science 2022-10-13 Agnieszka Tomczak , Aarushi Gupta , Slobodan Ilic , Nassir Navab , Shadi Albarqouni

Despite the success of deep neural networks (DNNs) in image classification tasks, the human-level performance relies on massive training data with high-quality manual annotations, which are expensive and time-consuming to collect. There…

Machine Learning · Computer Science 2019-04-15 Junnan Li , Yongkang Wong , Qi Zhao , Mohan Kankanhalli

Numerous researches have proved that deep neural networks (DNNs) can fit everything in the end even given data with noisy labels, and result in poor generalization performance. However, recent studies suggest that DNNs tend to gradually…

Machine Learning · Computer Science 2021-04-07 Hao Yang , Youzhi Jin , Ziyin Li , Deng-Bao Wang , Lei Miao , Xin Geng , Min-Ling Zhang