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Given two graphs $H$ and $G$, the Subgraph Isomorphism problem asks if $H$ is isomorphic to a subgraph of $G$. While NP-hard in general, algorithms exist for various parameterized versions of the problem: for example, the problem can be…

Data Structures and Algorithms · Computer Science 2013-08-27 Dániel Marx , Michał Pilipczuk

IC-planar graphs are those graphs that admit a drawing where no two crossed edges share an end-vertex and each edge is crossed at most once. They are a proper subfamily of the 1-planar graphs. Given an embedded IC-planar graph $G$ with $n$…

Computational Geometry · Computer Science 2016-07-19 Franz J. Brandenburg , Walter Didimo , William S. Evans , Philipp Kindermann , Giuseppe Liotta , Fabrizio Montecchiani

Combinatorial optimization problems near algorithmic phase transitions represent a fundamental challenge for both classical algorithms and machine learning approaches. Among them, graph coloring stands as a prototypical constraint…

Processing very large graphs like social networks, biological and chemical compounds is a challenging task. Distributed graph processing systems process the billion-scale graphs efficiently but incur overheads of efficient partitioning and…

Data Structures and Algorithms · Computer Science 2014-01-13 Kamran Najeebullah , Kifayat Ullah Khan , Waqas Nawaz , Young-Koo Lee

Graph coloring has been broadly used to discover concurrency in parallel computing. To speedup graph coloring for large-scale datasets, parallel algorithms have been proposed to leverage modern GPUs. Existing GPU implementations either have…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-01-22 Xuhao Chen , Pingfan Li , Jianbin Fang , Tao Tang , Zhiying Wang , Canqun Yang

Any graph with maximum degree $\Delta$ admits a proper vertex coloring with $\Delta + 1$ colors that can be found via a simple sequential greedy algorithm in linear time and space. But can one find such a coloring via a sublinear algorithm?…

Data Structures and Algorithms · Computer Science 2019-01-08 Sepehr Assadi , Yu Chen , Sanjeev Khanna

Let H be a graph, and let C_H(G) be the number of (subgraph isomorphic) copies of H contained in a graph G. We investigate the fundamental problem of estimating C_H(G). Previous results cover only a few specific instances of this general…

Data Structures and Algorithms · Computer Science 2019-02-20 Martin Furer , Shiva Prasad Kasiviswanathan

Path cover is a well-known intractable problem that finds a minimum number of vertex disjoint paths in a given graph to cover all the vertices. We show that a variant, where the objective function is not the number of paths but the number…

Data Structures and Algorithms · Computer Science 2018-03-09 Yinhui Cai , Guangting Chen , Yong Chen , Randy Goebel , Guohui Lin , Longcheng Liu , An Zhang

We present a parallel version of the cut-pursuit algorithm for minimizing functionals involving the graph total variation. We show that the decomposition of the iterate into constant connected components, which is at the center of this…

Data Structures and Algorithms · Computer Science 2019-05-08 Hugo Raguet , Loic Landrieu

The Kernel Polynomial Method (KPM) is one of the fast diagonalization methods used for simulations of quantum systems in research fields of condensed matter physics and chemistry. The algorithm has a difficulty to be parallelized on a…

Computational Physics · Physics 2011-05-30 Shixun Zhang , Shinichi Yamagiwa , Masahiko Okumura , Seiji Yunoki

Nowadays in Quantum Computing, the implementation of quantum algorithm has created a stir since Noisy Intermediate-Scale Quantum (NISQ) devices are out in the market. Researchers are mostly interested in solving NP-complete problems with…

Emerging Technologies · Computer Science 2021-07-12 Amit Saha , Debasri Saha , Amlan Chakrabarti

We introduce a variant of the graph coloring problem, which we denote as {\sc Budgeted Coloring Problem} (\bcp). Given a graph $G$, an integer $c$ and an ordered list of integers $\{b_1, b_2, \ldots, b_c\}$, \bcp asks whether there exists a…

Data Structures and Algorithms · Computer Science 2021-10-28 Susobhan Bandopadhyay , Suman Banerjee , Aritra Banik , Venkatesh Raman

The graph isomorphism problem has a long history in mathematics and computer science, with applications in computational chemistry and biology, and it is believed to be neither solvable in polynomial time nor NP-complete. E. Luks proposed…

Discrete Mathematics · Computer Science 2012-09-06 Adria Alcala Mena , Francesc Rossello

In the classic Maximum Weight Independent Set problem we are given a graph $G$ with a nonnegative weight function on vertices, and the goal is to find an independent set in $G$ of maximum possible weight. While the problem is NP-hard in…

Data Structures and Algorithms · Computer Science 2020-03-24 Andrzej Grzesik , Tereza Klimošová , Marcin Pilipczuk , Michał Pilipczuk

We present an optimized algorithm calculating determinant for multivariate polynomial matrix on GPU. The novel algorithm provides precise determinant for input multivariate polynomial matrix in controllable time. Our approach is based on…

Numerical Analysis · Mathematics 2020-10-26 Jianjun Wei , Liangyu Chen

The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…

Data Structures and Algorithms · Computer Science 2016-08-23 Andre Droschinsky , Nils M. Kriege , Petra Mutzel

Finding dense subgraphs of a large graph is a standard problem in graph mining that has been studied extensively both for its theoretical richness and its many practical applications. In this paper we introduce a new family of dense…

Data Structures and Algorithms · Computer Science 2021-06-07 Nate Veldt , Austin R. Benson , Jon Kleinberg

Let $G$ and $H$ be two simple graphs. A bijection $\phi:V(G)\rightarrow V(H)$ is called an isomorphism between $G$ and $H$ if $(\phi v_i)(\phi v_j)\in E(H)$ $\Leftrightarrow$ $v_i v_j\in E(G)$, $\forall v_i,v_j \in V(G)$. In the case that…

Combinatorics · Mathematics 2017-10-27 Wenxue Du

A graph is equitably $k$-colorable if its vertices can be partitioned into $k$ independent sets in such a way that the number of vertices in any two sets differ by at most one. The smallest $k$ for which such a coloring exists is known as…

Discrete Mathematics · Computer Science 2014-09-03 Hanna Furmańczyk , Marek Kubale

We obtain a weaker but still quasipolynomial version of Babai's famous GI-algorithm.

Group Theory · Mathematics 2017-07-18 László Pyber