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The Simulation Environment for Atomistic and Molecular Modeling (SEAMM) is an open-source software package written in Python that provides a graphical interface for setting up, executing, and analyzing molecular and materials simulations.…

Aligning theoretical atomistic structural models of materials with available experimental data presents a significant challenge for disordered systems. The configurational space to navigate is vast, and faithful realizations require large…

Materials Science · Physics 2025-09-29 Tigany Zarrouk , Miguel A. Caro

This article introduces TinyDEM, a lightweight implementation of a full-fledged discrete element method (DEM) solver in 3D. Newton's damped equations of motion are solved explicitly for translations and rotations of a polydisperse ensemble…

Computational Physics · Physics 2025-12-05 Roman Vetter

To address the magnetization dynamics in ferromagnetic materials described by the Landau-Lifshitz-Gilbert equation under large damping parameters, a third-order accurate numerical scheme is developed by building upon a second-order method…

Numerical Analysis · Mathematics 2025-10-31 Changjian Xie , Cheng Wang

Fourier solvers have become efficient tools to establish structure-property relations in heterogeneous materials. Introduced as an alternative to the Finite Element (FE) method, they are based on fixed-point solutions of the…

Computational Physics · Physics 2017-09-01 Jan Zeman , Tom W. J. de Geus , Jaroslav Vondřejc , Ron H. J. Peerlings , Marc G. D. Geers

This paper presents OpenGridGym, an open-source Python-based package that allows for seamless integration of distribution market simulation with state-of-the-art artificial intelligence (AI) decision-making algorithms. We present the…

Artificial Intelligence · Computer Science 2022-03-10 Rayan El Helou , Kiyeob Lee , Dongqi Wu , Le Xie , Srinivas Shakkottai , Vijay Subramanian

The Python package fluidsim is introduced in this article as an extensible framework for Computational Fluid Mechanics (CFD) solvers. It is developed as a part of FluidDyn project (Augier et al., 2018), an effort to promote open-source and…

Computational Engineering, Finance, and Science · Computer Science 2019-07-31 Ashwin Vishnu Mohanan , Cyrille Bonamy , Miguel Calpe Linares , Pierre Augier

A massively parallel simulation code, called \textit{dHybrid}, has been developed to perform global scale studies of space plasma interactions. This code is based on an explicit hybrid model; the numerical stability and parallel scalability…

Plasma Physics · Physics 2016-08-16 L. Gargaté , R. Bingham , R. A. Fonseca , L. O. Silva

Physics simulators are widely used in robotics fields, from mechanical design to dynamic simulation, and controller design. This paper presents an open-source MATLAB/Simulink simulator for rigid-body articulated systems, including…

Robotics · Computer Science 2022-11-18 Nuno Guedelha , Venus Pasandi , Giuseppe L'Erario , Silvio Traversaro , Daniele Pucci

In order to comprehensively investigate the multiphysics coupling in spintronic devices, it is essential to parallelize and utilize GPU-acceleration to address the spatial and temporal disparities inherent in the relevant physics.…

Computational Engineering, Finance, and Science · Computer Science 2026-02-17 Andy Nonaka , Yingheng Tang , Julian C. LePelch , Prabhat Kumar , Weiqun Zhang , Jorge A. Munoz , Christian Fernandez-Soria , Cesar Diaz , David J. Gardner , Zhi Jackie Yao

Most experiments with ultracold atoms in optical lattices have contact interactions, and therefore operate at high densities of around one atom per site to observe the effect of strong interactions. Strong ranged interactions can be…

Quantum Physics · Physics 2023-06-06 Daniel Malz , J. Ignacio Cirac

Scalable and efficient numerical simulations continue to gain importance, as computation is firmly established as the third pillar of discovery, alongside theory and experiment. Meanwhile, the performance of computing hardware grows through…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-26 Pietro Incardona , Antonio Leo , Yaroslav Zaluzhnyi , Rajesh Ramaswamy , Ivo F. Sbalzarini

While thousands of experimental physicists and chemists are currently trying to build scalable quantum computers, it appears that simulation of quantum computation will be at least as critical as circuit simulation in classical VLSI design.…

Quantum Physics · Physics 2007-05-23 George F. Viamontes , Manoj Rajagopalan , Igor L. Markov , John P. Hayes

Precise modeling of the magnetization dynamics of nanoparticles with finite size effects at fast varying temperatures is a computationally challenging task. Based on the Landau-Lifshitz-Bloch (LLB) equation we derive a coarse grained model…

Materials Science · Physics 2019-08-07 Christoph Vogler , Claas Abert , Florian Bruckner , Dieter Suess

The Finite Difference Time Domain (FDTD) method is a widely used numerical technique for solving Maxwell's equations, particularly in computational electromagnetics and photonics. It enables accurate modeling of wave propagation in complex…

Computation and Language · Computer Science 2025-04-15 Yifei He , Måns I. Andersson , Stefano Markidis

In this script handbook, we collect the basic (and partially upgraded) PHP scripts used for building the AMIDAS website (http://pisrv0.pit.physik.uni-tuebingen.de/darkmatter/amidas/), an online interactive simulation/data analysis system…

Instrumentation and Detectors · Physics 2014-03-26 Chung-Lin Shan

We present MISTIQS, a Multiplatform Software for Time-dependent Quantum Simulations. MISTIQS delivers end-to-end functionality for simulating the quantum many-body dynamics of systems governed by time-dependent Heisenberg Hamiltonians…

We developed a micromagnetic method for modeling magnetic systems with periodic boundary conditions along an arbitrary number of dimensions. The main feature is an adaptation of the Ewald summation technique for evaluation of long-range…

Mesoscale and Nanoscale Physics · Physics 2015-10-30 Aleksander L. Wysocki , Vladimir P. Antropov

The field of plasma physics heavily relies on simulations to model various phenomena, such as instabilities, turbulence, and nonlinear behaviors that would otherwise be difficult to study from a purely theoretical approach. Simulations are…

Plasma Physics · Physics 2026-02-05 Giorgio Daneri

Advances in LLMs have produced agents with knowledge and operational capabilities comparable to human scientists, suggesting potential to assist, accelerate, and automate research. However, existing studies mainly evaluate such systems on…