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Diffeomorphic deformable image registration is one of the crucial tasks in medical image analysis, which aims to find a unique transformation while preserving the topology and invertibility of the transformation. Deep convolutional neural…

Image and Video Processing · Electrical Eng. & Systems 2022-02-09 Ameneh Sheikhjafari , Michelle Noga , Kumaradevan Punithakumar , Nilanjan Ray

Magnetic resonance imaging (MRI) nowadays serves as an important modality for diagnostic and therapeutic guidance in clinics. However, the {\it slow acquisition} process, the dynamic deformation of organs, as well as the need for {\it…

Machine Learning · Computer Science 2016-09-15 Morteza Mardani , Georgios B. Giannakis , Kamil Ugurbil

Magnetic Resonance Imaging (MRI) is a widely utilized diagnostic tool in clinical settings, but its application is limited by the relatively long acquisition time. As a result, fast MRI reconstruction has become a significant area of…

Image and Video Processing · Electrical Eng. & Systems 2025-06-09 Lixuan Rao , Xinlin Zhang , Yiman Huang , Tao Tan , Tong Tong

The goal of dynamic magnetic resonance imaging (dynamic MRI) is to visualize tissue properties and their local changes over time that are traceable in the MR signal. We propose a new variational approach for the reconstruction of subsampled…

Neuroscience studies have revealed that the brain encodes visual content and embeds information in neural activity. Recently, deep learning techniques have facilitated attempts to address visual reconstructions by mapping brain activity to…

Image and Video Processing · Electrical Eng. & Systems 2022-07-05 Pei-Chun Chang , Yan-Yu Tien , Chia-Lin Chen , Li-Fen Chen , Yong-Sheng Chen , Hui-Ling Chan

MRI data is acquired in Fourier space/k-space. Data acquisition is typically performed on a Cartesian grid in this space to enable the use of a fast Fourier transform algorithm to achieve fast and efficient reconstruction. However, it has…

Signal Processing · Electrical Eng. & Systems 2024-01-17 Daniel Abraham , Mark Nishimura , Xiaozhi Cao , Congyu Liao , Kawin Setsompop

Magnetic resonance imaging (MRI) is an invaluable tool for clinical and research applications. Yet, variations in scanners and acquisition parameters cause inconsistencies in image contrast, hindering data comparability and reproducibility…

Image and Video Processing · Electrical Eng. & Systems 2025-09-09 Daniel Scholz , Ayhan Can Erdur , Robbie Holland , Viktoria Ehm , Jan C. Peeken , Benedikt Wiestler , Daniel Rueckert

Imaging through optical multimode fibers (MMFs) has the potential to enable hair-thin endoscopes that reduce the invasiveness of imaging deep inside tissues and organs. Current approaches predominantly require active wavefront shaping and…

Optics · Physics 2021-12-13 Szu-Yu Lee , Vicente J. Parot , Brett E. Bouma , Martin Villiger

This paper presents a deep learning method for faster magnetic resonance imaging (MRI) by reducing k-space data with sub-Nyquist sampling strategies and provides a rationale for why the proposed approach works well. Uniform subsampling is…

Machine Learning · Statistics 2019-05-14 Chang Min Hyun , Hwa Pyung Kim , Sung Min Lee , Sungchul Lee , Jin Keun Seo

We propose a novel unsupervised deep-learning-based algorithm for dynamic magnetic resonance imaging (MRI) reconstruction. Dynamic MRI requires rapid data acquisition for the study of moving organs such as the heart. Existing reconstruction…

Image and Video Processing · Electrical Eng. & Systems 2021-01-26 Jaejun Yoo , Kyong Hwan Jin , Harshit Gupta , Jerome Yerly , Matthias Stuber , Michael Unser

Magnetic resonance imaging (MRI) is a powerful imaging modality that revolutionizes medicine and biology. The imaging speed of high-dimensional MRI is often limited, which constrains its practical utility. Recently, low-rank tensor models…

Computer Vision and Pattern Recognition · Computer Science 2021-05-25 Zichang He , Bo Zhao , Zheng Zhang

Over almost five decades of development and improvement, Magnetic Resonance Imaging (MRI) has become a rich and powerful, non-invasive technique in medical imaging, yet not reaching its physical limits. Technical and physiological…

Nonuniform Fourier data are routinely collected in applications such as magnetic resonance imaging, synthetic aperture radar, and synthetic imaging in radio astronomy. To acquire a fast reconstruction that does not require an online inverse…

Numerical Analysis · Mathematics 2016-10-05 Anne Gelb , Guohui Song

3D Magnetic Resonance Imaging (MRI) is often a trade-off between fast but low-resolution image acquisition and highly detailed but slow image acquisition. Fast imaging is required for targets that move to avoid motion artefacts. This is in…

Computer Vision and Pattern Recognition · Computer Science 2017-09-26 Steven McDonagh , Benjamin Hou , Konstantinos Kamnitsas , Ozan Oktay , Amir Alansary , Mary Rutherford , Jo V. Hajnal , Bernhard Kainz

Magnetic resonance imaging (MRI) is a versatile imaging technique that allows different contrasts depending on the acquisition parameters. Many clinical imaging studies acquire MRI data for more than one of these contrasts---such as for…

Numerical Analysis · Mathematics 2017-10-06 Matthias J. Ehrhardt , Marta M. Betcke

Magnetic Resonance Imaging (MRI) is a pivotal clinical diagnostic tool, yet its extended scanning times often compromise patient comfort and image quality, especially in volumetric, temporal and quantitative scans. This review elucidates…

Magnetic resonance imaging (MRI) is a widely known medical imaging technique used to assess the heart function. Deep learning (DL) models perform several tasks in cardiac MRI (CMR) images with good efficacy, such as segmentation,…

Image and Video Processing · Electrical Eng. & Systems 2022-05-03 Daniel Lima , Catharine Graves , Marco Gutierrez , Bruno Brandoli , Jose Rodrigues-Jr

Compared with 2D MRI, 3D MRI provides superior volumetric spatial resolution and signal-to-noise ratio. However, it is more challenging to reconstruct 3D MRI images. Current methods are mainly based on convolutional neural networks (CNN)…

Image and Video Processing · Electrical Eng. & Systems 2023-06-01 Eric Z. Chen , Chi Zhang , Xiao Chen , Yikang Liu , Terrence Chen , Shanhui Sun

Accelerated Magnetic Resonance Imaging (MRI) requires careful optimization of k-space sampling patterns to balance acquisition speed and image quality. While recent advances in deep learning have shown promise in optimizing Cartesian…

Tissues and Organs · Quantitative Biology 2025-08-15 Ruru Xu , Ilkay Oksuz

Cardiac MRI (CMRI) is a cornerstone imaging modality that provides in-depth insights into cardiac structure and function. Multi-contrast CMRI (MCCMRI), which acquires sequences with varying contrast weightings, significantly enhances…

Image and Video Processing · Electrical Eng. & Systems 2024-11-05 George Yiasemis , Nikita Moriakov , Jan-Jakob Sonke , Jonas Teuwen