Related papers: Computing the Fr\'echet distance of trees and grap…

In Chordal/Interval Vertex Deletion we ask how many vertices one needs to remove from a graph to make it chordal (respectively: interval). We study these problems under the parameterization by treewidth $tw$ of the input graph $G$. On the…

We provide an $O(n \log n)$ algorithm computing the linear maximum induced matching width of a tree and an optimal layout.

We show that a variant of the continuous Frechet distance between polygonal curves can be computed using essentially the same algorithm used to solve the discrete version. The new variant is not necessarily monotone, but this shortcoming…

Computing bounded depth decompositions is a bottleneck in many applications of the treedepth parameter. The fastest known algorithm, which is due to Reidl, Rossmanith, S\'{a}nchez Villaamil, and Sikdar [ICALP 2014], runs in…

For most optimisation methods an essential assumption is the vector space structure of the feasible set. This condition is not fulfilled if we consider optimisation problems over the sphere. We present an algorithm for solving a special…

We consider the problem of finding the smallest graph that contains two input trees each with at most $n$ vertices preserving their distances. In other words, we look for an isometric-universal graph with the minimum number of vertices for…

Merge trees are fundamental structures in topological data analysis. Interleaving distance is a widely accepted metric for comparing merge trees, with applications in visualization and scientific computing. While a greedy algorithm exists…

For an undirected graph G, we consider the following problems: given a fixed graph H, can we partition the vertices of G into two non-empty sets A and B such that neither the induced graph G[A] nor G[B] contain H (i) as a subgraph? (ii) as…

The nni-distance is a well-known distance measure for phylogenetic trees. We construct an efficient parallel approximation algorithm for the nni-distance in the CRCW-PRAM model running in O(log n) time on O(n) processors. Given two…

We present efficient algorithms for computing a maximum agreement forest (MAF) of a pair of multifurcating (nonbinary) rooted trees. Our algorithms match the running times of the currently best algorithms for the binary case. The size of an…

A tree $t$-spanner of a graph $G$ is a spanning tree of $G$ such that the distance between pairs of vertices in the tree is at most $t$ times their distance in $G$. Deciding tree $t$-spanner admissible graphs has been proved to be tractable…

We introduce tree-width for first order formulae \phi, fotw(\phi). We show that computing fotw is fixed-parameter tractable with parameter fotw. Moreover, we show that on classes of formulae of bounded fotw, model checking is fixed…

(see paper for full abstract) Cut problems and connectivity problems on digraphs are two well-studied classes of problems from the viewpoint of parameterized complexity. After a series of papers over the last decade, we now have (almost)…

Tree rotations (left and right) are basic local deformations allowing to transform between two unlabeled binary trees of the same size. Hence, there is a natural problem of practically finding such transformation path with low number of…

We introduce graph width parameters, called $\alpha$-edge-crossing width and edge-crossing width. These are defined in terms of the number of edges crossing a bag of a tree-cut decomposition. They are motivated by edge-cut width, recently…

We give polynomial-time approximation schemes for monotone maximization problems expressible in terms of distances (up to a fixed upper bound) and efficiently solvable in graphs of bounded treewidth. These schemes apply in all fractionally…

In this paper we compare and illustrate the algorithmic use of graphs of bounded tree-width and graphs of bounded clique-width. For this purpose we give polynomial time algorithms for computing the four basic graph parameters independence…

We show that the eccentricities, diameter, radius, and Wiener index of an undirected $n$-vertex graph with nonnegative edge lengths can be computed in time $O(n\cdot \binom{k+\lceil\log n\rceil}{k} \cdot 2^k k^2 \log n)$, where $k$ is the…

Given a tree of weighted vertices, it is sometimes possible to break the tree into two equally-weighted subtrees within an allowable error. We give a fast algorithm that finds an edge which breaks the tree into equal-weight components or…

Dual-tree algorithms are a widely used class of branch-and-bound algorithms. Unfortunately, developing dual-tree algorithms for use with different trees and problems is often complex and burdensome. We introduce a four-part logical split:…