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In 1996, Bodlaender showed the celebrated result that an optimal tree decomposition of a graph of bounded treewidth can be found in linear time. The algorithm is based on an algorithm of Bodlaender and Kloks that computes an optimal tree…

Data Structures and Algorithms · Computer Science 2020-03-19 Ernst Althaus , Sarah Ziegler

A recent work shows how we can optimize a tree based mode of operation for a rate 1 hash function. In particular, an algorithm and a theorem are presented for selecting a good tree topology in order to optimize both the running time and the…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-04-15 Kevin Atighehchi

Huffman Codes are optimal Instantaneous Fixed-to-Variable (FV) codes in which every source symbol can only be encoded by one codeword. Relaxing these constraints permits constructing better FV codes. More specifically, recent work has shown…

Information Theory · Computer Science 2020-01-31 Mordecai Golin , Elfarouk Harb

Decision tree optimization is fundamental to interpretable machine learning. The most popular approach is to greedily search for the best feature at every decision point, which is fast but provably suboptimal. Recent approaches find the…

Machine Learning · Computer Science 2025-11-19 Varun Babbar , Hayden McTavish , Cynthia Rudin , Margo Seltzer

The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…

Data Structures and Algorithms · Computer Science 2016-08-23 Andre Droschinsky , Nils M. Kriege , Petra Mutzel

Dormant pruning for fresh market fruit trees is a relatively unexplored application of agricultural robotics for which few end-to-end systems exist. One of the biggest challenges in creating an autonomous pruning system is the need to…

Robotics · Computer Science 2021-03-05 Alexander You , Cindy Grimm , Abhisesh Silwal , Joseph R. Davidson

A widely used method for determining the similarity of two labeled trees is to compute a maximum agreement subtree of the two trees. Previous work on this similarity measure is only concerned with the comparison of labeled trees of two…

Computer Vision and Pattern Recognition · Computer Science 2007-05-23 Ming-Yang Kao , Tak-Wah Lam , Wing-Kin Sung , Hing-Fung Ting

The Minimum Quartet Tree Cost problem is to construct an optimal weight tree from the $3{n \choose 4}$ weighted quartet topologies on $n$ objects, where optimality means that the summed weight of the embedded quartet topologies is optimal…

Machine Learning · Computer Science 2014-09-16 Rudi L. Cilibrasi , Paul M. B. Vitanyi

Suppose we have n keys, n access probabilities for the keys, and n+1 access probabilities for the gaps between the keys. Let h_min(n) be the minimal height of a binary search tree for n keys. We consider the problem to construct an optimal…

Data Structures and Algorithms · Computer Science 2010-11-08 Peter Becker

Tree codes, introduced by Schulman, are combinatorial structures essential to coding for interactive communication. An infinite family of tree codes with both rate and distance bounded by positive constants is called asymptotically good.…

Information Theory · Computer Science 2019-09-18 Anand Kumar Narayanan , Matthew Weidner

Huffman coding finds a prefix code that minimizes mean codeword length for a given probability distribution over a finite number of items. Campbell generalized the Huffman problem to a family of problems in which the goal is to minimize not…

Information Theory · Computer Science 2007-07-16 Michael B. Baer

In 1997 Klav\v{z}ar and Gutman suggested a generalization of the Wiener index to vertex-weighted graphs. We minimize the Wiener index over the set of trees with the given vertex weights' and degrees' sequences and show an optimal tree to be…

Combinatorics · Mathematics 2015-09-23 Mikhail Goubko

A text written using symbols from a given alphabet can be compressed using the Huffman code, which minimizes the length of the encoded text. It is necessary, however, to employ a text-specific codebook, i.e. the symbol-codeword dictionary,…

Information Theory · Computer Science 2022-08-02 Armen E. Allahverdyan , Andranik Khachatryan

For a given independent and identically distributed (i.i.d.) source, Huffman code achieves the optimal average codeword length in the class of instantaneous code with a single code table. However, it is known that there exist time-variant…

Information Theory · Computer Science 2022-09-20 Kengo Hashimoto , Ken-ichi Iwata

Finding optimal evolutionary trees from sequence data is typically an intractable problem, and there is usually no way of knowing how close to optimal the best tree from some search truly is. The problem would seem to be particularly acute…

Populations and Evolution · Quantitative Biology 2013-06-07 Dietrich Radel , Andreas Sand , Mike Steel

This article focuses on properties and structures of trees with maximum mean subtree order in a given family; such trees are called optimal in the family. Our main goal is to describe the structure of optimal trees in $\mathcal{T}_n$ and…

Combinatorics · Mathematics 2018-11-16 Lucas Mol , Ortrud R. Oellermann

Huffman coding is known to be optimal, yet its dynamic version may be even more efficient in practice. A new variant of Huffman encoding has been proposed recently, that provably always performs better than static Huffman coding by at least…

Data Structures and Algorithms · Computer Science 2020-05-19 Aharon Fruchtman , Yoav Gross , Shmuel T. Klein , Dana Shapira

We propose new succinct representations of ordinal trees, which have been studied extensively. It is known that any $n$-node static tree can be represented in $2n + o(n)$ bits and a number of operations on the tree can be supported in…

Data Structures and Algorithms · Computer Science 2010-09-27 Gonzalo Navarro , Kunihiko Sadakane

We consider the problem of constructing an an optimal-weight tree from the 3*(n choose 4) weighted quartet topologies on n objects, where optimality means that the summed weight of the embedded quartet topologiesis optimal (so it can be the…

Data Structures and Algorithms · Computer Science 2011-11-09 Rudi Cilibrasi , Paul M. B. Vitanyi

The decision tree is one of the most fundamental programming abstractions. A commonly used type of decision tree is the alphabetic binary tree, which uses (without loss of generality) ``less than'' versus ''greater than or equal to'' tests…

Performance · Computer Science 2007-07-13 Michael B. Baer