English
Related papers

Related papers: Phase-field collagen fibrils: Coupling chirality a…

200 papers

Semiflexible polymers such as filamentous actin play a vital role in the mechanical behavior of cells, yet the basic properties of cross-linked F-actin networks remain poorly understood. To address this issue, we have performed numerical…

Soft Condensed Matter · Physics 2009-11-10 D. A. Head , A. J. Levine , F. C. MacKintosh

We derive an equation that governs the spatiotemporal dynamics of small amplitude alternans in paced cardiac tissue. We show that a pattern-forming linear instability leads to the spontaneous formation of stationary or traveling waves whose…

Statistical Mechanics · Physics 2009-11-07 Blas Echebarria , Alain Karma

The packing problem of long thin filaments that are injected into confined spaces is of fundamental interest for physicists and biologists alike. How linear threads pack and coil is well known only for the ideal case of rigid containers,…

Soft Condensed Matter · Physics 2015-12-11 Roman Vetter , Falk K. Wittel , Hans J. Herrmann

Collagen fibrils are the most important structural component of tendons. Their crimped structure and parallel arrangement within the tendon lead to a distinctive non-linear stress-strain curve when a tendon is stretched. Microstructural…

Tissues and Organs · Quantitative Biology 2021-03-09 James Gregory , Tom Shearer , Andrew L. Hazel

A multiscale scheme combining molecular dynamics (MD) and microscopic phase-field theory is proposed to study the structural phase transformations in solids with inhomogeneous strain field. The approach calculates strain response based on…

Materials Science · Physics 2007-05-23 Zhi-Rong Liu , Huajian Gao

By comparing cumulative linear mass profiles of 12 Gould Belt molecular clouds within 500 pc, we study how the linear mass distributions of molecular clouds vary with the angles between the molecular cloud long axes and the directions of…

Astrophysics of Galaxies · Physics 2019-06-25 Chi Yan Law , Hua Bai Li , Pokin Leung

The shape of the cross section of a dense fiber bundle is related to the symmetry of its molecular packing. However, this statement might be belied by type I collagen fibrils which have a rounded section of high symmetry while structural…

Soft Condensed Matter · Physics 2013-03-22 Jean Charvolin , Jean-François Sadoc

Using laser tweezers and fluorescence confocal polarizing microscopy, we study colloidal interactions of solid microspheres in the nematic bulk caused by elastic distortions around the particles with strong tangential surface anchoring. The…

Soft Condensed Matter · Physics 2009-11-11 I. I. Smalyukh , O. D. Lavrentovich , A. N. Kuzmin , A. V. Kachynski , P. N. Prasad

By mapping the interactions of colloidal particles onto the problem of minimizing areas, the physics of foams can be used to understand the phase diagrams of both charged and fuzzy colloids. We extend this analogy to study the elastic…

Soft Condensed Matter · Physics 2007-05-23 W. Kung , P. Ziherl , R. D. Kamien

The rheological properties of fibrin networks have been of long-standing interest. As such there is a wealth of studies of their shear and tensile responses, but their compressive behavior remains unexplored. Here, by characterization of…

Soft Condensed Matter · Physics 2015-08-27 O. V. Kim , Xiaojun Liang , Rustem I. Litvinov , John W. Weisel , Mark S. Alber , Prashant K. Purohit

We investigate a flexible polymer chain made up of chiral active Brownian particles in two dimensions using computer simulations. In the presence of chiral active Brownian forces, the radius of gyration of the chain reduces significantly.…

Soft Condensed Matter · Physics 2025-05-05 Shalabh K. Anand

Interactions between crawling cells, which are essential for many biological processes, can be quantified by measuring cell-cell collisions. Conventionally, experiments of cell-cell collisions are conducted on two-dimensional flat…

Biological Physics · Physics 2025-10-24 Yongtian Luo , Amrinder S. Nain , Brian A. Camley

We study the optical characteristics of a photonic crystal (PhC) heterostructure cavity consisting of two-dimensional monolayer PhC, sandwiched between two identical passive multilayers. In the range of stopband of the multilayer, guided…

Optics · Physics 2015-10-02 M. Srinivas Reddy , R. Vijaya

A curious feature of organ and organoid morphogenesis is that in certain cases, spatial oscillations in the thickness of the growing "film" are out-of-phase with the deformation of the slower-growing "substrate," while in other cases, the…

Biological Physics · Physics 2018-12-26 T. A. Engstrom , Teng Zhang , A. K. Lawton , A. L. Joyner , J. M. Schwarz

The mineralized collagen fibril is the main building block of hard tissues and it directly affects the macroscopic mechanics of biological tissues such as bone. The mechanical behavior of the fibril itself is determined by its structure:…

Tissues and Organs · Quantitative Biology 2024-03-19 Julia Kamml , Claire Acevedo , David Kammer

We analyze the pattern formation in systems of active particles with chiral forces in the context of pedestrian dynamics. To describe the interparticle interactions, we use the standard social force model and supplement it with a new type…

Statistical Mechanics · Physics 2024-04-30 Anna S. Bodrova , Fatema Al Najim , N. V. Brilliantov

We numerically examine mixtures of circularly moving and passive disks as a function of density and active orbit radius. For low or intermediate densities and/or small orbit radii, the system can organize into a reversible partially phase…

Soft Condensed Matter · Physics 2019-09-13 C. Reichhardt , C. J. O. Reichhardt

We review theoretical investigations on the origin of the orbital selective phase where localized and itinerant electrons coexist in the d shell at intermediate strength of the on-site Coulomb interactions between electrons. In particular,…

Strongly Correlated Electrons · Physics 2014-03-10 Yao Yao , Yu-Zhong Zhang , Hunpyo Lee , Harald O. Jeschke , Roser Valenti , Hai-Qing Lin , Chang-Qin Wu

Previous studies of the modulation instability (MI) of continuous waves (CWs) in a two-core fiber (TCF) did not consider effects caused by co-propagation of the two polarized modes in a TCF that possesses birefringence, such as cross-phase…

Optics · Physics 2012-07-03 J. H. Li , K. S. Chiang , B. A. Malomed , K. W. Chow

Motor proteins drive persistent motion and self-organisation of cytoskeletal filaments. However, state-of-the-art microscopy techniques and continuum modelling approaches focus on large length and time scales. Here, we perform…

Soft Condensed Matter · Physics 2024-06-03 Gerrit Vliegenthart , Arvind Ravichandran , Marisol Ripoll , Thorsten Auth , Gerhard Gompper