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We initiate the study of computational problems on $k$-mers (strings of length $k$) in labeled graphs. As a starting point, we consider the problem of counting the number of distinct $k$-mers found on the walks of a graph. We establish that…

Data Structures and Algorithms · Computer Science 2026-02-23 Jarno N. Alanko , Maximo Perez-Lopez

In the $\ell$-Component Order Connectivity problem ($\ell \in \mathbb{N}$), we are given a graph $G$ on $n$ vertices, $m$ edges and a non-negative integer $k$ and asks whether there exists a set of vertices $S\subseteq V(G)$ such that…

Data Structures and Algorithms · Computer Science 2025-02-24 Mithilesh Kumar , Daniel Lokshtanov

A monitoring edge-geodetic set of a graph is a subset $M$ of its vertices such that for every edge $e$ in the graph, deleting $e$ increases the distance between at least one pair of vertices in $M$. We study the following computational…

Computational Complexity · Computer Science 2025-05-27 Florent Foucaud , Clara Marcille , R. B. Sandeep , Sagnik Sen , S Taruni

The Treewidth-2 Vertex Deletion problem asks whether a set of at most $t$ vertices can be removed from a graph, such that the resulting graph has treewidth at most two. A graph has treewidth at most two if and only if it does not contain a…

Data Structures and Algorithms · Computer Science 2022-03-21 Jeroen L. G. Schols

We study the design of fixed-parameter algorithms for problems already known to be solvable in polynomial time. The main motivation is to get more efficient algorithms for problems with unattractive polynomial running times. Here, we focus…

Computational Complexity · Computer Science 2021-01-06 Archontia C. Giannopoulou , George B. Mertzios , Rolf Niedermeier

Coresets have become an invaluable tool for solving $k$-means and kernel $k$-means clustering problems on large datasets with small numbers of clusters. On the other hand, spectral clustering works well on sparse graphs and has recently…

Machine Learning · Computer Science 2025-03-11 Ben Jourdan , Gregory Schwartzman , Peter Macgregor , He Sun

Given a graph G and k pairs of vertices (s_1,t_1), ..., (s_k,t_k), the k-Vertex-Disjoint Paths problem asks for pairwise vertex-disjoint paths P_1, ..., P_k such that P_i goes from s_i to t_i. Schrijver [SICOMP'94] proved that the…

Discrete Mathematics · Computer Science 2013-04-16 Marek Cygan , Dániel Marx , Marcin Pilipczuk , Michał Pilipczuk

Given a graph $G(V,E)$, a vertex subset $S$ of $G$ is called an open packing in $G$ if no pair of distinct vertices in $S$ have a common neighbour in $G$. The size of a largest open packing in $G$ is called the open packing number,…

Discrete Mathematics · Computer Science 2024-07-15 M. A. Shalu , V. K. Kirubakaran

In the Directed Disjoint Paths problem, we are given a digraph $D$ and a set of requests $\{(s_1, t_1), \ldots, (s_k, t_k)\}$, and the task is to find a collection of pairwise vertex-disjoint paths $\{P_1, \ldots, P_k\}$ such that each…

Data Structures and Algorithms · Computer Science 2021-12-21 Raul Lopes , Ignasi Sau

The graph parameters highway dimension and skeleton dimension were introduced to capture the properties of transportation networks. As many important optimization problems like Travelling Salesperson, Steiner Tree or $k$-Center arise in…

Discrete Mathematics · Computer Science 2019-11-20 Johannes Blum

We consider (closed neighbourhood) packings and their generalization in graphs called limited packings. A vertex set X in a graph G is a k-limited packing if for any vertex $v\in V(G)$, $\left|N[v] \cap X\right| \le k$, where $N[v]$ is the…

Discrete Mathematics · Computer Science 2014-07-08 Andrei Gagarin , Vadim Zverovich

For a graph $G$, a subset $S\subseteq V(G)$ is called a resolving set of $G$ if, for any two vertices $u,v\in V(G)$, there exists a vertex $w\in S$ such that $d(w,u)\neq d(w,v)$. The Metric Dimension problem takes as input a graph $G$ on…

Data Structures and Algorithms · Computer Science 2025-03-18 Florent Foucaud , Esther Galby , Liana Khazaliya , Shaohua Li , Fionn Mc Inerney , Roohani Sharma , Prafullkumar Tale

Given a graph $G = (V,E)$, a set $T$ of vertex pairs, and an integer $k$, Hitting Geodesic Intervals asks whether there is a set $S \subseteq V$ of size at most $k$ such that for each terminal pair $\{u,v\} \in T$, the set $S$ intersects at…

Data Structures and Algorithms · Computer Science 2025-09-03 Tatsuya Gima , Yasuaki Kobayashi , Yuto Okada , Yota Otachi , Hayato Takaike

Golovach, Paulusma and Song (Inf. Comput. 2014) asked to determine the parameterized complexity of the following problems parameterized by $k$: (1) Given a graph $G$, a clique modulator $D$ (a clique modulator is a set of vertices, whose…

Data Structures and Algorithms · Computer Science 2019-07-30 Gregory Gutin , Diptapriyo Majumdar , Sebastian Ordyniak , Magnus Wahlström

In a (parameterized) graph edge modification problem, we are given a graph $G$, an integer $k$ and a (usually well-structured) class of graphs $\mathcal{G}$, and ask whether it is possible to transform $G$ into a graph $G' \in \mathcal{G}$…

Data Structures and Algorithms · Computer Science 2021-09-17 Gabriel Bathie , Nicolas Bousquet , Théo Pierron

We study the computational complexity of routing multiple objects through a network in such a way that only few collisions occur: Given a graph $G$ with two distinct terminal vertices and two positive integers $p$ and $k$, the question is…

Computational Complexity · Computer Science 2017-05-11 Till Fluschnik , Marco Morik , Manuel Sorge

Graph-structured data arise ubiquitously in many application domains. A fundamental problem is to quantify their similarities. Graph kernels are often used for this purpose, which decompose graphs into substructures and compare these…

Machine Learning · Computer Science 2020-03-26 Wei Ye , Zhen Wang , Rachel Redberg , Ambuj Singh

Let integers $r\ge 2$ and $d\ge 3$ be fixed. Let ${\cal G}_d$ be the set of graphs with no induced path on $d$ vertices. We study the problem of packing $k$ vertex-disjoint copies of $K_{1,r}$ ($k\ge 2$) into a graph $G$ from parameterized…

Data Structures and Algorithms · Computer Science 2015-10-14 Florian Barbero , Gregory Gutin , Mark Jones , Bin Sheng , Anders Yeo

The NP-hard Metric Dimension problem is to decide for a given graph G and a positive integer k whether there is a vertex subset of size at most k that separates all vertex pairs in G. Herein, a vertex v separates a pair {u,w} if the…

Computational Complexity · Computer Science 2012-11-08 Sepp Hartung , André Nichterlein

Recently, some large kernel convnets strike back with appealing performance and efficiency. However, given the square complexity of convolution, scaling up kernels can bring about an enormous amount of parameters and the proliferated…

Computer Vision and Pattern Recognition · Computer Science 2024-03-19 Honghao Chen , Xiangxiang Chu , Yongjian Ren , Xin Zhao , Kaiqi Huang
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