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Persistent homology analysis provides means to capture the connectivity structure of data sets in various dimensions. On the mathematical level, by defining a metric between the objects that persistence attaches to data sets, we can…

Machine Learning · Computer Science 2019-06-12 Henri Riihimäki , José Licón-Saláiz

Computing homology and cohomology is at the heart of many recent works and a key issue for topological data analysis. Among homological objects, homology generators are useful to locate or understand holes (especially for geometric…

Algebraic Topology · Mathematics 2025-12-22 Yann-Situ Gazull , Aldo Gonzalez-Lorenzo , Alexandra Bac

Persistent homology (PH) is a powerful mathematical method to automatically extract relevant insights from images, such as those obtained by high-resolution imaging devices like electron microscopes or new-generation telescopes. However,…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-15 Riccardo Ceccaroni , Lorenzo Di Rocco , Umberto Ferraro Petrillo , Pierpaolo Brutti

We propose a novel approach for preserving topological structures of the input space in latent representations of autoencoders. Using persistent homology, a technique from topological data analysis, we calculate topological signatures of…

Machine Learning · Computer Science 2021-06-01 Michael Moor , Max Horn , Bastian Rieck , Karsten Borgwardt

We apply modern methods in computational topology to the task of discovering and characterizing phase transitions. As illustrations, we apply our method to four two-dimensional lattice spin models: the Ising, square ice, XY, and…

Statistical Mechanics · Physics 2021-10-04 Alex Cole , Gregory J. Loges , Gary Shiu

Persistent homology provides information about the lifetime of homology classes along a filtration of cell complexes. Persistence barcode is a graphical representation of such information. A filtration might be determined by time in a set…

Computer Vision and Pattern Recognition · Computer Science 2018-01-04 Rocio Gonzalez-Diaz , Maria-Jose Jimenez , Belen Medrano

We introduce a theoretical and computational framework to use discrete Morse theory as an efficient preprocessing in order to compute zigzag persistent homology. From a zigzag filtration of complexes $(K_i)$, we introduce a zigzag Morse…

Computational Geometry · Computer Science 2019-07-12 Clément Maria , Hannah Schreiber

Persistent homology tracks topological features across geometric scales, encoding birth and death of cycles as barcodes. We develop a complementary theory where the filtration parameter is algebraic precision rather than geometric scale.…

Algebraic Topology · Mathematics 2025-11-04 Robert Ghrist , Cassie Ding

The exact computation of the matching distance for multi-parameter persistence modules is an active area of research in computational topology. Achieving an easily obtainable exact computation of this distance would permit multi-parameter…

Algebraic Topology · Mathematics 2025-10-22 Asilata Bapat , Robyn Brooks , Celia Hacker , Claudia Landi , Barbara I. Mahler , Elizabeth R. Stephenson

In the theory of persistent homology, a well known duality relates the barcodes of the absolute homology and relative cohomology of a one-parameter simplicial filtration. Motivated by the problem of computing free presentations of the…

Commutative Algebra · Mathematics 2026-03-20 Ulrich Bauer , Fabian Lenzen , Michael Lesnick

The Vietoris-Rips filtration for an $n$-point metric space is a sequence of large simplicial complexes adding a topological structure to the otherwise disconnected space. The persistent homology is a key tool in topological data analysis…

Computational Geometry · Computer Science 2017-09-19 Vitaliy Kurlin

This article studies the robust version of persistent homology based on trimming methodology to capture the geometric feature through support of the data in presence of outliers. Precisely speaking, the proposed methodology works when the…

Methodology · Statistics 2026-01-01 Tuhin Subhra Mahato , Subhra Sankar Dhar

Persistent homology is a tool that can be employed to summarize the shape of data by quantifying homological features. When the data is an object in $\mathbb{R}^d$, the (augmented) persistent homology transform ((A)PHT) is a family of…

Computational Geometry · Computer Science 2022-12-27 Brittany Terese Fasy , Samuel Micka , David L. Millman , Anna Schenfisch , Lucia Williams

Topological data analysis is an emerging area in exploratory data analysis and data mining. Its main tool, persistent homology, has become a popular technique to study the structure of complex, high-dimensional data. In this paper, we…

Graphics · Computer Science 2017-10-04 Mustafa Hajij , Bei Wang , Carlos Scheidegger , Paul Rosen

In topological data analysis, we want to discern topological and geometric structure of data, and to understand whether or not certain features of data are significant as opposed to simply random noise. While progress has been made on…

Computational Geometry · Computer Science 2020-01-10 So Mang Han , Taylor Okonek , Nikesh Yadav , Xiaojun Zheng

This paper presents a new clustering algorithm for space-time data based on the concepts of topological data analysis and in particular, persistent homology. Employing persistent homology - a flexible mathematical tool from algebraic…

Machine Learning · Statistics 2019-10-28 Umar Islambekov , Yulia Gel

In this paper we focus on preprocessing for persistent homology computations. We adapt some techniques which were successfully used for standard homology computations. The main idea is to reduce the complex prior to generating its boundary…

Geometric Topology · Mathematics 2013-05-01 Paweł Dłotko , Hubert Wagner

The persistence barcode is a topological descriptor of data that plays a fundamental role in topological data analysis. Given a filtration of data, the persistence barcode tracks the evolution of its homology groups. In this paper, we…

Computational Geometry · Computer Science 2025-10-14 Tao Hou , Salman Parsa , Bei Wang

A topological invariant of a polynomial map $p:X\to B$ from a complex surface containing a curve $C\subset X$ to a one-dimensional base is given by a rational second homology class in the compactification of the moduli space of genus $g$…

Algebraic Geometry · Mathematics 2007-05-23 Paul Norbury

Convection is a well-studied topic in fluid dynamics, yet it is less understood in the context of networks flows. Here, we incorporate techniques from topological data analysis (namely, persistent homology) to automate the detection and…

Dynamical Systems · Mathematics 2022-03-15 Minh Quang Le , Dane Taylor
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