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Quantitative Susceptibility Mapping (QSM) estimates tissue magnetic susceptibility distributions from Magnetic Resonance (MR) phase measurements by solving an ill-posed dipole inversion problem. Conventional single orientation QSM methods…

Image and Video Processing · Electrical Eng. & Systems 2020-08-13 Kuo-Wei Lai , Manisha Aggarwal , Peter van Zijl , Xu Li , Jeremias Sulam

We present a novel deep learning approach to reconstruct confocal microscopy stacks from single light field images. To perform the reconstruction, we introduce the LFMNet, a novel neural network architecture inspired by the U-Net design. It…

Image and Video Processing · Electrical Eng. & Systems 2020-03-25 Josue Page , Federico Saltarin , Yury Belyaev , Ruth Lyck , Paolo Favaro

Tomographic image reconstruction is relevant for many medical imaging modalities including X-ray, ultrasound (US) computed tomography (CT) and photoacoustics, for which the access to full angular range tomographic projections might be not…

Image and Video Processing · Electrical Eng. & Systems 2019-06-14 Valery Vishnevskiy , Richard Rau , Orcun Goksel

Deep learning methods can be found in many medical imaging applications. Recently, those methods were applied directly to the RF ultrasound multi-channel data to enhance the quality of the reconstructed images. In this paper, we apply a…

Signal Processing · Electrical Eng. & Systems 2020-11-23 Nissim Peretz , Arie Feuer

Magnetic resonance imaging (MRI) is increasingly utilized for image-guided radiotherapy due to its outstanding soft-tissue contrast and lack of ionizing radiation. However, geometric distortions caused by gradient nonlinearity (GNL) limit…

Purpose To develop and evaluate a deep learning-based method (MC-Net) to suppress motion artifacts in brain magnetic resonance imaging (MRI). Methods MC-Net was derived from a UNet combined with a two-stage multi-loss function. T1-weighted…

Image and Video Processing · Electrical Eng. & Systems 2022-10-26 Lei Zhang , Xiaoke Wang , Michael Rawson , Radu Balan , Edward H. Herskovits , Elias Melhem , Linda Chang , Ze Wang , Thomas Ernst

The quick and accurate retrieval of an object height from a single fringe pattern in Fringe Projection Profilometry has been a topic of ongoing research. While a single shot fringe to depth CNN based method can restore height map directly…

Computer Vision and Pattern Recognition · Computer Science 2023-05-01 Yixiao Wang , Canlin Zhou , Xingyang Qi , Hui Li

Spectral computed tomography (CT) is an emerging technology capable of providing high chemical specificity, which is crucial for many applications such as detecting threats in luggage. This type of application requires both fast and…

Image and Video Processing · Electrical Eng. & Systems 2021-03-30 Wail Mustafa , Christian Kehl , Ulrik Lund Olsen , Søren Kimmer Schou Gregersen , David Malmgren-Hansen , Jan Kehres , Anders Bjorholm Dahl

We present a method combining affinity prediction with region agglomeration, which improves significantly upon the state of the art of neuron segmentation from electron microscopy (EM) in accuracy and scalability. Our method consists of a…

Computer Vision and Pattern Recognition · Computer Science 2020-07-29 Jan Funke , Fabian David Tschopp , William Grisaitis , Arlo Sheridan , Chandan Singh , Stephan Saalfeld , Srinivas C. Turaga

Deep Learning (DL) based methods for magnetic resonance (MR) image reconstruction have been shown to produce superior performance in recent years. However, these methods either only leverage under-sampled data or require a paired…

Computer Vision and Pattern Recognition · Computer Science 2021-12-17 Pengfei Guo , Vishal M. Patel

Purpose: Neural networks have received recent interest for reconstruction of undersampled MR acquisitions. Ideally network performance should be optimized by drawing the training and testing data from the same domain. In practice, however,…

Computer Vision and Pattern Recognition · Computer Science 2019-05-07 Salman Ul Hassan Dar , Muzaffer Özbey , Ahmet Burak Çatlı , Tolga Çukur

Recent research has explored using neural networks to reconstruct undersampled magnetic resonance imaging (MRI) data. Because of the complexity of the artifacts in the reconstructed images, there is a need to develop task-based approaches…

Image and Video Processing · Electrical Eng. & Systems 2022-10-25 Joshua D. Herman , Rachel E. Roca , Alexandra G. O'Neill , Marcus L. Wong , Sajan G. Lingala , Angel R. Pineda

MRI is an inherently slow process, which leads to long scan time for high-resolution imaging. The speed of acquisition can be increased by ignoring parts of the data (undersampling). Consequently, this leads to the degradation of image…

Image and Video Processing · Electrical Eng. & Systems 2022-02-22 Soumick Chatterjee , Mario Breitkopf , Chompunuch Sarasaen , Hadya Yassin , Georg Rose , Andreas Nürnberger , Oliver Speck

Robustness of deep learning methods for limited angle tomography is challenged by two major factors: a) due to insufficient training data the network may not generalize well to unseen data; b) deep learning methods are sensitive to noise.…

Image and Video Processing · Electrical Eng. & Systems 2019-08-29 Yixing Huang , Alexander Preuhs , Guenter Lauritsch , Michael Manhart , Xiaolin Huang , Andreas Maier

Reconstruction of few-view x-ray Computed Tomography (CT) data is a highly ill-posed problem. It is often used in applications that require low radiation dose in clinical CT, rapid industrial scanning, or fixed-gantry CT. Existing analytic…

Image and Video Processing · Electrical Eng. & Systems 2019-10-15 Hyojin Kim , Rushil Anirudh , K. Aditya Mohan , Kyle Champley

Low-field (LF) MRI scanners have the power to revolutionize medical imaging by providing a portable and cheaper alternative to high-field MRI scanners. However, such scanners are usually significantly noisier and lower quality than their…

Image and Video Processing · Electrical Eng. & Systems 2022-11-29 Aryan Kalluvila , Neha Koonjoo , Danyal Bhutto , Marcio Rockenbach , Matthew S. Rosen

Deep learning models usually require sufficient training data to achieve high accuracy, but obtaining labeled data can be time-consuming and labor-intensive. Here we introduce a template-based training method to train a 3D U-Net model from…

Image and Video Processing · Electrical Eng. & Systems 2023-08-07 Fang-Cheng Yeh

Adversarially trained deep neural networks have significantly improved performance of single image super resolution, by hallucinating photorealistic local textures, thereby greatly reducing the perception difference between a real high…

Computer Vision and Pattern Recognition · Computer Science 2019-01-23 Francis Tom , Himanshu Sharma , Dheeraj Mundhra , Tathagato Rai Dastidar , Debdoot Sheet

Limited-angle computed tomography (CT) is often used in clinical applications such as C-arm CT for interventional imaging. However, CT images from limited angles suffers from heavy artifacts due to incomplete projection data. Existing…

Computer Vision and Pattern Recognition · Computer Science 2017-08-01 Jawook Gu , Jong Chul Ye

To develop a deep-learning method for achieving fast high-resolution MR elastography from highly undersampled data without the need of high-quality training dataset. We first framed the deep neural network representation as a nonlinear…

Signal Processing · Electrical Eng. & Systems 2026-01-21 Xi Peng