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Related papers: EoN (Epidemics on Networks): a fast, flexible Pyth…

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Epidemic spreading is well understood when a disease propagates around a contact graph. In a stochastic susceptible-infected-susceptible setting, spectral conditions characterise whether the disease vanishes. However, modelling human…

Social and Information Networks · Computer Science 2021-09-15 Desmond John Higham , Henry-Louis de Kergorlay

This paper investigates the effect of the structure of the contact network on the dynamics of the epidemic outbreak. In particular, we focus on the peak number of critically infected nodes (PCIN), determining the maximum workload of…

Populations and Evolution · Quantitative Biology 2022-03-01 Yulian Kuryliak , Michael Emmerich , Dmytro Dosyn

Nowadays, the emergence of online services provides various multi-relation information to support the comprehensive understanding of the epidemic spreading process. In this Letter, we consider the edge weights to represent such multi-role…

Physics and Society · Physics 2015-06-16 Ye Sun , Chuang Liu , Chu-Xu Zhang , Zi-Ke Zhang

We present an epidemiological compartment model, SAIR(S), that explicitly captures the dynamics of asymptomatic infected individuals in an epidemic spread process. We first present a group model and then discuss networked versions. We…

Populations and Evolution · Quantitative Biology 2021-03-23 Xiaoqi Bi , Carolyn L. Beck

We consider the spread of infectious disease through contact networks of Configuration Model type. We assume that the disease spreads through contacts and infected individuals recover into an immune state. We discuss a number of existing…

Populations and Evolution · Quantitative Biology 2014-03-11 Joel C Miller , Istvan Z Kiss

Advancing epidemic dynamics forecasting is vital for targeted interventions and safeguarding public health. Current approaches mainly fall into two categories: mechanism-based and data-driven models. Mechanism-based models are constrained…

Machine Learning · Computer Science 2025-08-05 Rui Sun , Chenghua Gong , Tianjun Gu , Yuhao Zheng , Jie Ding , Juyuan Zhang , Liming Pan , Linyuan Lü

We propose the deep demixing (DDmix) model, a graph autoencoder that can reconstruct epidemics evolving over networks from partial or aggregated temporal information. Assuming knowledge of the network topology but not of the epidemic model,…

Social and Information Networks · Computer Science 2023-06-14 Boning Li , Gojko Čutura , Ananthram Swami , Santiago Segarra

We study some simple models of disease transmission on small-world networks, in which either the probability of infection by a disease or the probability of its transmission is varied, or both. The resulting models display epidemic behavior…

Statistical Mechanics · Physics 2009-10-31 Cristopher Moore , M. E. J. Newman

Structural Equation Modeling (SEM) is an umbrella term that includes numerous multivariate statistical techniques that are employed throughout a plethora of research areas, ranging from social to natural sciences. Until recently, SEM…

Applications · Statistics 2021-06-10 Georgy Meshcheryakov , Anna A. Igolkina , Maria G. Samsonova

Contagion processes on networks, including disease spreading, information diffusion, or social behaviors propagation, can be modeled as simple contagion, i.e. involving one connection at a time, or as complex contagion, in which multiple…

Physics and Society · Physics 2023-06-19 Giulia Cencetti , Diego Andrés Contreras , Marco Mancastroppa , Alain Barrat

Spread of computer viruses can be modeled as the SIS (susceptible-infected-susceptible) epidemic propagation. We show that in order to ensure the random immunization or the targeted immunization effectively prevent computer viruses…

Physics and Society · Physics 2012-07-17 Jinyu Huang

Social media is an easy-to-access platform providing timely updates about societal trends and events. Discussions regarding epidemic-related events such as infections, symptoms, and social interactions can be crucial for informing…

Computation and Language · Computer Science 2024-05-27 Tanmay Parekh , Anh Mac , Jiarui Yu , Yuxuan Dong , Syed Shahriar , Bonnie Liu , Eric Yang , Kuan-Hao Huang , Wei Wang , Nanyun Peng , Kai-Wei Chang

The design of an efficient curing policy, able to stem an epidemic process at an affordable cost, has to account for the structure of the population contact network supporting the contagious process. Thus, we tackle the problem of…

Optimization and Control · Mathematics 2017-12-04 Stefania Ottaviano , Francesco De Pellegrini , Stefano Bonaccorsi , Piet Van Mieghem

This study develops the epidemic hitting time (EHT) metric on graphs measuring the expected time an epidemic starting at node $a$ in a fully susceptible network takes to propagate and reach node $b$. An associated EHT centrality measure is…

Physics and Society · Physics 2015-12-02 Max Goering , Faryad Darabi Sahneh , Nathan Albin , Caterina Scoglio , Pietro Poggi-Corradini

COVID-19 has resulted in a public health global crisis. The pandemic control necessitates epidemic models that capture the trends and impacts on infectious individuals. Many exciting models can implement this but they lack practical…

Computers and Society · Computer Science 2021-04-13 Ou Deng , Kiichi Tago , Qun Jin

Epidemic models are used to analyze the progression or outcome of an epidemic under different control policies like vaccinations, quarantines, lockdowns, use of face-masks, pharmaceutical interventions, etc. When these models accurately…

Quantitative Methods · Quantitative Biology 2022-04-19 Carlos Hernandez-Suarez , Osval Montsinos Lopez , Ramon Solano-Barajas

We introduce NetworKit, an open-source software package for analyzing the structure of large complex networks. Appropriate algorithmic solutions are required to handle increasingly common large graph data sets containing up to billions of…

Social and Information Networks · Computer Science 2015-11-16 Christian L. Staudt , Aleksejs Sazonovs , Henning Meyerhenke

Absenteeism of elementary school children has been shown to be effective in the early detection of an incoming influenza epidemic within a given population. This paper introduces DESA, an R package designed to: 1) model an epidemic using…

Applications · Statistics 2026-03-11 Vinay Joshy , Zeny Feng , Lorna Deeth , Kayla Vanderkruk , Justin Slater

Thompson sampling (TS) is a popular heuristic for action selection, but it requires sampling from a posterior distribution. Unfortunately, this can become computationally intractable in complex environments, such as those modeled using…

A model for epidemic spreading on rewiring networks is introduced and analyzed for the case of scale free steady state networks. It is found that contrary to what one would have naively expected, the rewiring process typically tends to…

Physics and Society · Physics 2013-05-29 Yonathan Schwarzkopf , Attila Rakos , David Mukamel