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Principal component analysis (PCA) has been widely applied to dimensionality reduction and data pre-processing for different applications in engineering, biology and social science. Classical PCA and its variants seek for linear projections…

Machine Learning · Computer Science 2017-07-11 Xiaojun Chang , Feiping Nie , Yi Yang , Heng Huang

Single-cell RNA sequencing (scRNA-seq) is widely used to reveal heterogeneity in cells, which has given us insights into cell-cell communication, cell differentiation, and differential gene expression. However, analyzing scRNA-seq data is a…

Quantitative Methods · Quantitative Biology 2023-10-24 Sean Cottrell , Yuta Hozumi , Guo-Wei Wei

We propose a new approach to analyze data that naturally lie on manifolds. We focus on a special class of manifolds, called direct product manifolds, whose intrinsic dimension could be very high. Our method finds a low-dimensional…

Applications · Statistics 2011-04-19 Sungkyu Jung , Mark Foskey , J. S. Marron

Recently years, the attempts on distilling mobile data into useful knowledge has been led to the deployment of machine learning algorithms at the network edge. Principal component analysis (PCA) is a classic technique for extracting the…

Information Theory · Computer Science 2022-04-04 Zezhong Zhang , Guangxu Zhu , Rui Wang , Vincent K. N. Lau , Kaibin Huang

Functional principal component analysis (FPCA) is an important technique for dimension reduction in functional data analysis (FDA). Classical FPCA method is based on the Karhunen-Lo\`{e}ve expansion, which assumes a linear structure of the…

Methodology · Statistics 2023-06-27 Rou Zhong , Chunming Zhang , Jingxiao Zhang

The $k$-principal component analysis ($k$-PCA) problem is a fundamental algorithmic primitive that is widely-used in data analysis and dimensionality reduction applications. In statistical settings, the goal of $k$-PCA is to identify a top…

Numerical Analysis · Mathematics 2024-06-12 Arun Jambulapati , Syamantak Kumar , Jerry Li , Shourya Pandey , Ankit Pensia , Kevin Tian

Linear dimensionality reduction techniques, notably principal component analysis, are widely used in climate data analysis as a means to aid in the interpretation of datasets of high dimensionality. These linear methods may not be…

Atmospheric and Oceanic Physics · Physics 2009-01-06 Ian Ross

Efficient representations of data are essential for processing, exploration, and human understanding, and Principal Component Analysis (PCA) is one of the most common dimensionality reduction techniques used for the analysis of large,…

Computation · Statistics 2023-11-06 Olga Dorabiala , Aleksandr Aravkin , J. Nathan Kutz

In this work, we investigate Riemannian geometry based dimensionality reduction methods that respect the underlying manifold structure of the data. In particular, we focus on Principal Geodesic Analysis (PGA) as a nonlinear generalization…

Machine Learning · Computer Science 2026-02-06 Alaa El Ichi , Khalide Jbilou

Principal component analysis (PCA) is an essential algorithm for dimensionality reduction in many data science domains. We address the problem of performing a federated PCA on private data distributed among multiple data providers while…

We propose MNPCA, a novel non-linear generalization of (2D)$^2${PCA}, a classical linear method for the simultaneous dimension reduction of both rows and columns of a set of matrix-valued data. MNPCA is based on optimizing over separate…

Statistics Theory · Mathematics 2023-10-11 Joni Virta , Andreas Artemiou

Recovering intrinsic low dimensional subspaces from data distributed on them is a key preprocessing step to many applications. In recent years, there has been a lot of work that models subspace recovery as low rank minimization problems. We…

Machine Learning · Computer Science 2014-12-09 Hongyang Zhang , Zhouchen Lin , Chao Zhang , Junbin Gao

Principal component analysis (PCA) is often used to reduce the dimension of data by selecting a few orthonormal vectors that explain most of the variance structure of the data. L1 PCA uses the L1 norm to measure error, whereas the…

Machine Learning · Statistics 2020-09-04 Young Woong Park , Diego Klabjan

Principal Component Analysis (PCA) is one of the most important unsupervised methods to handle high-dimensional data. However, due to the high computational complexity of its eigen decomposition solution, it hard to apply PCA to the…

Machine Learning · Computer Science 2016-03-29 Feiping Nie , Heng Huang

Data integration, or the strategic analysis of multiple sources of data simultaneously, can often lead to discoveries that may be hidden in individualistic analyses of a single data source. We develop a new unsupervised data integration…

Methodology · Statistics 2021-04-06 Tiffany M. Tang , Genevera I. Allen

A novel text data dimension reduction technique, called the tree-structured multi-linear principal component anal- ysis (TMPCA), is proposed in this work. Being different from traditional text dimension reduction methods that deal with the…

Computation and Language · Computer Science 2018-02-27 Yuanhang Su , Yuzhong Huang , C. -C. Jay Kuo

These notes are an overview of some classical linear methods in Multivariate Data Analysis. This is a good old domain, well established since the 60's, and refreshed timely as a key step in statistical learning. It can be presented as part…

Numerical Analysis · Mathematics 2023-05-25 Alain Franc

Revisiting PCA for Time Series Reduction in Temporal Dimension; Jiaxin Gao, Wenbo Hu, Yuntian Chen; Deep learning has significantly advanced time series analysis (TSA), enabling the extraction of complex patterns for tasks like…

Machine Learning · Computer Science 2024-12-30 Jiaxin Gao , Wenbo Hu , Yuntian Chen

Sparse principal component analysis (PCA) is an important technique for dimensionality reduction of high-dimensional data. However, most existing sparse PCA algorithms are based on non-convex optimization, which provide little guarantee on…

Methodology · Statistics 2019-11-20 Yixuan Qiu , Jing Lei , Kathryn Roeder

In order to classify the nonlinear feature with linear classifier and improve the classification accuracy, a deep learning network named kernel principal component analysis network (KPCANet) is proposed. First, mapping the data into higher…

Machine Learning · Computer Science 2015-12-22 Dan Wu , Jiasong Wu , Rui Zeng , Longyu Jiang , Lotfi Senhadji , Huazhong Shu