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In this paper we detail the reformulation and rewrite of core functions in the spBayes R package. These efforts have focused on improving computational efficiency, flexibility, and usability for point-referenced data models. Attention is…

Computation · Statistics 2013-10-31 Andrew O. Finley , Sudipto Banerjee , Alan E. Gelfand

Spatial and spatiotemporal machine-learning models require a suitable framework for their model assessment, model selection, and hyperparameter tuning, in order to avoid error estimation bias and over-fitting. This contribution reviews the…

Machine Learning · Statistics 2022-11-03 Patrick Schratz , Marc Becker , Michel Lang , Alexander Brenning

We exploit Gaussian copulas to specify a class of multivariate circular distributions and obtain parametric models for the analysis of correlated circular data. This approach provides a straightforward extension of traditional multivariate…

Methodology · Statistics 2024-06-07 Francesco Lagona , Marco Mingione

The stopp R package deals with spatio-temporal point processes which might have occurred on the Euclidean space or on some specific linear networks such as roads of a city. The package contains functions to summarize, plot, and perform…

Methodology · Statistics 2023-02-28 Nicoletta D'Angelo , Giada Adelfio

Diffusion models have been widely used in time series and spatio-temporal data, enhancing generative, inferential, and downstream capabilities. These models are applied across diverse fields such as healthcare, recommendation, climate,…

Machine Learning · Computer Science 2025-12-09 Yiyuan Yang , Ming Jin , Haomin Wen , Chaoli Zhang , Yuxuan Liang , Lintao Ma , Yi Wang , Chenghao Liu , Bin Yang , Zenglin Xu , Shirui Pan , Qingsong Wen

While existing mathematical descriptions can accurately account for phenomena at microscopic scales (e.g. molecular dynamics), these are often high-dimensional, stochastic and their applicability over macroscopic time scales of physical…

Machine Learning · Statistics 2016-09-08 P. S. Koutsourelakis , Elias Bilionis

Inverse problems with spatiotemporal observations are ubiquitous in scientific studies and engineering applications. In these spatiotemporal inverse problems, observed multivariate time series are used to infer parameters of physical or…

Methodology · Statistics 2022-04-26 Shiwei Lan , Shuyi Li , Mirjeta Pasha

Time series data are ubiquitous nowadays. Whereas most of the literature on the topic deals with real-valued time series, categorical time series have received much less attention. However, the development of data mining techniques for this…

Machine Learning · Statistics 2023-04-26 Ángel López Oriona , José Antonio Vilar Fernández

The development of analytical software for big Earth observation data faces several challenges. Designers need to balance between conflicting factors. Solutions that are efficient for specific hardware architectures can not be used in other…

Crossover designs are widely applied in medicine, agriculture, and other biological sciences, yet their analysis remains challenging due to longitudinal observations within each unit and the presence of carry-over effects. Despite their…

Computation · Statistics 2025-12-18 N. A. Cruz , O. O. Melo , C. A. Martinez , R. Alberich

CensSpatial is an R package for analyzing spatial censored data through linear models. It offers a set of tools for simulating, estimating, making predictions, and performing local influence diagnostics for outlier detection. The package…

Methodology · Statistics 2021-10-13 Jose A. Ordonez , Christian E. Galarza , Victor H. Lachos

A software package has been developed to bridge the R analysis model with the conceptual analysis environment typical of radiation physics experiments. The new package has been used in the context of a project for the validation of…

Computational Physics · Physics 2013-11-25 Andreas Pfeiffer , Maria Grazia Pia

Circular data are data measured in angles and occur in a variety of scientific disciplines. Bayesian methods promise to allow for flexible analysis of circular data. Three existing MCMC methods (Gibbs, Metropolis-Hastings, and Rejection)…

Computation · Statistics 2015-05-12 Kees Tim Mulder , Irene Klugkist

Spatial survival analysis has received a great deal of attention over the last 20 years due to the important role that geographical information can play in predicting survival. This paper provides an introduction to a set of programs for…

Computation · Statistics 2018-04-25 Haiming Zhou , Timothy Hanson , Jiajia Zhang

Background: Time-to-event data with multiple time scales are observed in many epidemiological and clinical studies. While models that allow for simultaneous consideration of multiple time scales for the hazard of an event have been…

Methodology · Statistics 2026-03-16 Angela Carollo , Paul H. C. Eilers , Hein Putter , Jutta Gampe

Disaggregation modelling, or downscaling, has become an important discipline in epidemiology. Surveillance data, aggregated over large regions, is becoming more common, leading to an increasing demand for modelling frameworks that can deal…

Computation · Statistics 2020-01-15 Anita K. Nandi , Tim C. D. Lucas , Rohan Arambepola , Peter Gething , Daniel J. Weiss

The advent of miniaturized biologging devices has provided ecologists with unprecedented opportunities to record animal movement across scales, and led to the collection of ever-increasing quantities of tracking data. In parallel,…

Quantitative Methods · Quantitative Biology 2019-10-16 Rocio Joo , Matthew E. Boone , Thomas A. Clay , Samantha C. Patrick , Susana Clusella-Trullas , Mathieu Basille

varstan is an \proglang{R} package for Bayesian analysis of time series models using \proglang{Stan}. The package offers a dynamic way to choose a model, define priors in a wide range of distributions, check model's fit, and forecast with…

Computation · Statistics 2020-05-22 Izhar Asael Alonzo Matamoros , Cristian Andres Cruz Torres

Recent developments in data science and big data research have produced an abundance of large data sets that are too big to be analyzed in their entirety, due to limits on either computer memory or storage capacity. Here, we introduce our R…

Applications · Statistics 2015-04-27 Alexey Miroshnikov , Evgeny Savel'ev , Erin M. Conlon

The analysis of spatial observations on a sphere is important in areas such as geosciences, physics and embryo research, just to name a few. The purpose of the package rcosmo is to conduct efficient information processing, visualisation,…

Computation · Statistics 2019-07-15 Daniel Fryer , Ming Li , Andriy Olenko