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Vegetation patterns, a natural phenomenon observed worldwide, are typically driven by spatially distributed feedback. However, the spatial colonization mechanisms of clonal plants, driven by the growth of a rhizome, are usually not…

Populations and Evolution · Quantitative Biology 2020-07-01 Daniel Ruiz-Reynés , Francesca Schönsberg , Emilio Hernández-García , Damià Gomila

We propose here to interpret and model peculiar plant morphologies (cushions, tussocks) observed in the Andean altiplano as localized structures. Such structures resulting in a patchy, aperiodic aspect of the vegetation cover are…

Pattern Formation and Solitons · Physics 2015-06-22 P. Couteron , F. Anthelme , M. Clerc , D. Escaff , C. Fernandez-Oto , M. Tlidi

The adoption of agroecological practices will be crucial to address the challenges of climate change and biodiversity loss. Such practices favor the cultivation of plants in complex mixtures with layouts differing from the monoculture…

Populations and Evolution · Quantitative Biology 2024-09-26 Julian Talbot , Pascal Viot , David Colliaux

In pattern-forming systems, localized patterns are states of intermediate complexity between fully extended ordered patterns and completely irregular patterns. They are formed by stationary fronts enclosing an ordered pattern inside an…

Pattern Formation and Solitons · Physics 2013-08-06 G. Kozyreff , S. J. Chapman

We study a class of minimal geometric partial differential equations that serves as a framework to understand the evolution of boundaries between states in different pattern forming systems. The framework combines normal growth, curvature…

Analysis of PDEs · Mathematics 2023-11-06 James H. von Brecht , Scott G. McCalla , Eun Heui Kim

Patches of vegetation consist of dense clusters of shrubs, grass, or trees, often found to be circular characteristic size, defined by the properties of the vegetation and terrain. Therefore, vegetation patches can be interpreted as…

Pattern Formation and Solitons · Physics 2017-11-29 Mustapha Tlidi , Ignacio Bordeu , Marcel G. Clerc , Daniel Escaff

We propose a general population dynamics model for two seagrass species growing and interacting in two spatial dimensions. The model includes spatial terms accounting for the clonal growth characteristics of seagrasses, and coupling between…

Populations and Evolution · Quantitative Biology 2023-04-20 Pablo Moreno-Spiegelberg , Damià Gomila

We study an individual based model describing competition in space between two different alleles. Although the model is similar in spirit to classic models of spatial population genetics such as the stepping stone model, here however space…

Populations and Evolution · Quantitative Biology 2015-03-20 Simone Pigolotti , Roberto Benzi , Prasad Perlekar Mogens H. Jensen , Federico Toschi , David R. Nelson

In growing populations, the fate of mutations depends on their competitive ability against the ancestor and their ability to colonize new territory. Here we present a theory that integrates both aspects of mutant fitness by coupling the…

Populations and Evolution · Quantitative Biology 2023-01-19 Daniel W. Swartz , Hyunseok Lee , Mehran Kardar , Kirill S. Korolev

In the growth of bacterial colonies, a great variety of complex patterns are observed in experiments, depending on external conditions and the bacterial species. Typically, existing models employ systems of reaction-diffusion equations or…

Biological Physics · Physics 2019-11-12 Lautaro Vassallo , David Hansmann , Lidia A. Braunstein

Logistic growth of diffusing reactants on spatial domains with long range competition is studied. The bifurcations cascade involved in the transition from the homogenous state to a spatially modulated stable solution is presented, and a…

Pattern Formation and Solitons · Physics 2009-11-11 Yosef E. Maruvka , Nadav M. Shnerb

Traditional approaches to ecosystem modelling have relied on spatially homogeneous approximations to interaction, growth and death. More recently, spatial interaction and dispersal have also been considered. While these leads to certain…

Populations and Evolution · Quantitative Biology 2010-10-07 Thomas Adams \ast , Graeme Ackland , Glenn Marion , Colin Edwards

Most organisms grow in space, whether they are viruses spreading within a host tissue or invasive species colonizing a new continent. Evolution typically selects for higher expansion rates during spatial growth, but it has been suggested…

Populations and Evolution · Quantitative Biology 2022-05-18 Hyunseok Lee , Jeff Gore , Kirill S. Korolev

The first chapter concerns monotype population models. We first study general birth and death processes and we give non-explosion and extinction criteria, moment computations and a pathwise representation. We then show how different scales…

Probability · Mathematics 2017-07-06 Vincent Bansaye , Sylvie Méléard

In this paper we introduce a model of spatial network growth in which nodes are placed at randomly selected locations on a unit square in $\mathbb{R}^2$, forming new connections to old nodes subject to the constraint that edges do not…

Physics and Society · Physics 2016-02-12 Garvin Haslett , Seth Bullock , Markus Brede

Discrete time, spatially extended models play an important role in ecology, modelling population dynamics of species ranging from micro-organisms to birds. An important question is how 'bottom up', individual-based models can be…

Populations and Evolution · Quantitative Biology 2023-01-20 Linnéa Gyllingberg , David J. T. Sumpter , Åke Brännström

Regular vegetation patterns in semiarid ecosystems are believed to arise from the interplay between long-range competition and facilitation processes acting at smaller distances. We show that, under rather general conditions, long-range…

Populations and Evolution · Quantitative Biology 2014-07-24 Ricardo Martinez-Garcia , Justin M. Calabrese , Emilio Hernandez-Garcia , Cristobal Lopez

Competition between independently arising beneficial mutations is enhanced in spatial populations due to the linear rather than exponential growth of clones. Recent theoretical studies have pointed out that the resulting fitness dynamics is…

Populations and Evolution · Quantitative Biology 2014-11-11 Jakub Otwinowski , Joachim Krug

Localized deformation patterns are a common motif in morphogenesis and are increasingly finding widespread applications in materials science, for instance as memory devices. Here we describe the emergence of spatially localized deformations…

Soft Condensed Matter · Physics 2019-06-12 Thomas C. T. Michaels , Remy Kusters , Alexander J. Dear , Cornelis Storm , James C. Weaver , L. Mahadevan

Seagrasses are key structural elements in coastal ecosystems, and studying how temperature affects these species is crucial to anticipate the implications of global warming. In this work, we use an empirically-based numerical model to study…

Populations and Evolution · Quantitative Biology 2023-05-12 Eva Llabrés , Aina Blanco-Magadán , Marta Sales , Tomàs Sintes
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