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Contact processes (CP's) with particle creation requiring a minimal neighborhood (restrictive or threshold CP's) present a novel sort of discontinuous absorbing transitions, that revealed itself robust under the inclusion of different…

Statistical Mechanics · Physics 2016-03-30 Salete Pianegonda , C. E. Fiore

Mutualistic networks are formed when the interactions between two classes of species are mutually beneficial. They are important examples of cooperation shaped by evolution. Mutualism between animals and plants plays a key role in the…

Populations and Evolution · Quantitative Biology 2013-08-23 Samir Suweis , Filippo Simini , Jayanth R. Banavar , Amos Maritan

Models of coordinated behavior of populations living in the same environment are introduced for the cases when they either compete with each other, or they both gain by mutual interactions, or finally when one hunts the other one. The…

Dynamical Systems · Mathematics 2014-03-19 D. Melchionda , E. Pastacaldi , C. Perri , E. Venturino

Population boundary is a classic indicator of climatic response in ecology. In addition to known challenges, the spatial and dynamical characteristics of the boundary are not only affected by the spatial gradient in the environmental…

Populations and Evolution · Quantitative Biology 2020-02-06 R. Juhász , I. A. Kovács

Spatial pattern formation is a key feature of many natural systems in physics, chemistry and biology. The essential theoretical issue in understanding pattern formation is to explain how a spatially homogeneous initial state can undergo…

Pattern Formation and Solitons · Physics 2015-06-04 Timothy Killingback , Gregory Loftus , Bala Sundaram

We consider Riesz-type nonlocal energies with general interaction kernels and their discretizations related to particle systems. We prove that the discretized energies $\Gamma$-converge in the weak-$*$ topology to the Riesz functional…

Analysis of PDEs · Mathematics 2025-10-09 Davide Carazzato , Aldo Pratelli , Ihsan Topaloglu

Banded patterns consisting of alternating bare soil and dense vegetation have been observed in water-limited ecosystems across the globe, often appearing along gently sloped terrain with the stripes aligned transverse to the elevation…

Pattern Formation and Solitons · Physics 2023-06-16 Punit Gandhi , Lucien Werner , Sarah Iams , Karna Gowda , Mary Silber

Coherent propagation of two interacting particles in $1d$ weak random potential is considered. An accurate estimate of the matrix element of interaction in the basis of localized states leads to mapping onto the relevant matrix model. This…

Statistical Mechanics · Physics 2009-10-28 I. V. Ponomarev , P. G. Silvestrov

Patchy colloidal model with three and four equivalent patches, confined in the attractive random porous media, undergo re-entrant gas-liquid phase separation with the possibility for the liquid phase density to approach zero. This unusual…

Soft Condensed Matter · Physics 2022-05-11 Taras Hvozd , Yurij V. Kalyuzhnyi , Vojko Vlachy , Peter T. Cummings

A stable population network is hard to interrupt without any ecological consequences. A communication blockage between patches may destabilize the populations in the ecological network. This work deals with the construction of a safe cut…

Dynamical Systems · Mathematics 2018-04-25 Dinesh Kumar , Jatin Gupta , Soumyendu Raha

We study the statistics of ecosystems with a variable number of co-evolving species. The species interact in two ways: by prey-predator relationships and by direct competition with similar kinds. The interaction coefficients change slowly…

Adaptation and Self-Organizing Systems · Physics 2015-06-26 Michael Lassig , Ugo Bastolla , Susanna C. Manrubia , Angelo Valleriani

Interactions between organisms are mediated by an intricate network of physico-chemical substances and other organisms. Understanding the dynamics of mediators and how they shape the population spatial distribution is key to predict…

Populations and Evolution · Quantitative Biology 2025-01-07 E. H. Colombo , L. Defaveri , C. Anteneodo

Separating environmental effects from those of interspecific interactions on species distributions has always been a central objective of community ecology. Despite years of effort in analysing patterns of species co-occurrences and the…

Populations and Evolution · Quantitative Biology 2023-08-30 Marc Ohlmann , Catherine Matias , Giovanni Poggiato , Stéphane Dray , Wilfried Thuiller , Vincent Miele

Ecological communities with many species can be classified into dynamical phases. In systems with all-to-all interactions, a phase where a fixed point is always reached and a dynamically-fluctuating phase have been found. The dynamics when…

Populations and Evolution · Quantitative Biology 2023-08-04 Stav Marcus , Ari M Turner , Guy Bunin

We introduce the concept of 'dynamical phase coexistence' to provide a simple solution for a long-standing problem in theoretical ecology, the so-called "savanna problem". The challenge is to understand why in savanna ecosystems trees and…

Biological Physics · Physics 2010-03-09 F. Vazquez , C. Lopez , J. M. Calabrese , M. A. Munoz

A biological pathway represents a set of genes that serves a particular cellular or a physiological function. The genes within the same pathway are expected to function together and hence may interact with each other. It is also known that…

Methodology · Statistics 2012-06-14 Zaili Fang , Inyoung Kim , Jeesun Jung

We present a numerical study of the dynamics of a non-ideal fluid subject to a density-dependent pseudo-potential characterized by a hierarchy of nested attractive and repulsive interactions. It is shown that above a critical threshold of…

Soft Condensed Matter · Physics 2009-11-10 A. Lamura , S. Succi

We propose a minimal model for spherical proteins with aeolotopic pair interactions to describe the equilibrium phase behavior of lysozyme. The repulsive screened Coulomb interactions between the particles are taken into account assuming…

Soft Condensed Matter · Physics 2012-03-27 Christoph Gogelein , Gerhard Nagele , Remco Tuinier , Thomas Gibaud , Anna Stradner , Peter Schurtenberger

We investigate real-space localization in the few-particle regime of the XXZ spin-$1/2$ chain with a random magnetic field. Our investigation focuses on the time evolution of the spatial variance of non-equilibrium densities, as resulting…

Strongly Correlated Electrons · Physics 2017-04-13 Daniel Schmidtke , Robin Steinigeweg , Jacek Herbrych , Jochen Gemmer

Phase separation in complex systems is a ubiquitous phenomenon. While simple theories predict coarsening until only macroscopically large phases remain, concrete models often exhibit patterns with finite length scales. To unify such models,…

Soft Condensed Matter · Physics 2025-11-10 Filipe C. Thewes , Yicheng Qiang , Oliver W. Paulin , David Zwicker
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