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The migration of active particles in slowly moving, crowded, and heterogeneous media is fundamental to various biological processes and technological applications, such as cargo transport. In this study, we numerically investigate the…

Soft Condensed Matter · Physics 2024-12-04 Meng-Yuan Li , Ning Zheng , Yan-Wei Li

An extremely broad and important class of phenomena in nature involves the settling and aggregation of matter under gravitation in fluid systems. Some examples include: sedimenting marine snow particles in lakes and oceans (central to…

Fluid Dynamics · Physics 2019-05-21 Roberto Camassa , Daniel M. Harris , Robert Hunt , Zeliha Kilic , Richard M. McLaughlin

Computational models of collective behavior in birds has allowed us to infer interaction rules directly from experimental data. Using a generic form of these rules we explore the collective behavior and emergent dynamics of a simulated…

Adaptation and Self-Organizing Systems · Physics 2012-07-24 Michael Small , Xiaoke Xu

Scroll waves are three-dimensional analogs of spiral waves. The linear stability spectrum of untwisted and twisted scroll waves is computed for a two-variable reaction-diffusion model of an excitable medium. Different bands of modes are…

Condensed Matter · Physics 2007-05-23 Herve Henry , Vincent Hakim

When animal groups move coherently in the form of a flock, their trajectories are not all parallel, the individuals exchange their position in the group. In this Letter we introduce a measure of this mixing dynamics, which we quantify as…

Statistical Mechanics · Physics 2015-06-29 Jean-Baptiste Caussin , Denis Bartolo

We study systems of active particles, whose perception is constrained by a vision cone, that are attracted to other particles and repelled from static obstacles. We report a novel self-trapping mechanism: active particles with…

Statistical Mechanics · Physics 2024-11-08 Rodrigo Saavedra , Fernando Peruani

The acoustofluidic method holds great promise for manipulating microorganisms. When exposed to the steady vortex structures of acoustic streaming flow, these microorganisms exhibit intriguing dynamic behaviors, such as hydrodynamic trapping…

Fluid Dynamics · Physics 2025-04-25 Xuyang Sun , Wenchang Tan , Yi Man

The evolution of entanglement in a one-dimensional Ising chain is numerically studied under various initial conditions. We analyze two problems concerning the dynamics of the entanglement: (i) generation of the entanglement from the…

Quantum Physics · Physics 2009-11-13 G. B. Furman , V. M. Meerovich , V. L. Sokolovsky

In networked systems, the interplay between the dynamics of individual subsystems and their network interactions has been found to generate multistability in various contexts. Despite its ubiquity, the specific mechanisms and ingredients…

Dynamical Systems · Mathematics 2024-11-22 Kalel L. Rossi , Everton S. Medeiros , Peter Ashwin , Ulrike Feudel

Schooling fish exhibit giant rotating clusters such as balls, tori, and rings, among other collective patterns. In order to account for their giantness and flexible shape change, we introduce an agent-based model that limits the number of…

Adaptation and Self-Organizing Systems · Physics 2022-06-02 Susumu Ito , Nariya Uchida

We present an experimental study of the statistical properties of millimeter-size spheres floating on the surface of a turbulent flow. The flow is generated in a layer of liquid metal by an electromagnetic forcing. By using two magnet…

Fluid Dynamics · Physics 2016-07-04 Pablo Gutiérrez , Sébastien Aumaître

Rotors are common in nature - from rotating membrane-proteins to superfluid-vortices. Yet, little is known about the collective dynamics of heterogeneous populations of rotors. Here, we show experimentally, numerically, and analytically…

Soft Condensed Matter · Physics 2024-09-13 Mattan Gelvan , Artyom Chirko , Jonathan Kirpitch , Yahav Lavie , Noa Israel , Naomi Oppenheimer

Cellular tissue behavior is a multiscale problem. At the cell level, out of equilibrium, biochemical reactions drive physical cell-cell interactions in a typical active matter process. Cell modeling computer simulations are a robust tool to…

Soft Condensed Matter · Physics 2021-02-09 Emanuel F. Teixeira , Heitor C. M. Fernandes , Leonardo G. Brunnet

Abnormal electrical activity from the boundaries of ischemic cardiac tissue is recognized as one of the major causes in generation of ischemia-reperfusion arrhythmias. Here we present theoretical analysis of the waves of electrical activity…

Tissues and Organs · Quantitative Biology 2015-05-19 Vadim N. Biktashev , Irina V. Biktasheva , Narine A. Sarvazyan

The complex formations exhibited by schooling fish have long been the object of fascination for biologists and physicists. However, the physical and sensory mechanisms leading to organized collective behavior remain elusive. On the physical…

Fluid Dynamics · Physics 2025-07-09 Anand U. Oza , Eva Kanso , Michael J. Shelley

Many organisms in nature use local interactions to generate global cooperative phenomena. To unravel how the behavior of individuals generates effective interactions within a group, we introduce a simple model, wherein each agent senses the…

Statistical Mechanics · Physics 2024-02-20 Samudrajit Thapa , Bat-El Pinchasik , Yair Shokef

We formulate a reduced model to analyze the motion of the core of a twisted scroll wave. The model is first shown to provide a simple description of the onset and nonlinear evolution of the helical state appearing in the sproing bifurcation…

Pattern Formation and Solitons · Physics 2007-05-23 B. Echebarria , V. Hakim , H. Henry

Pattern formation in ultra-cold quantum systems has recently received a great deal of attention.In this work, we investigate a two-dimensional model system accounting for the dynamics of trapped ions. We find a novel spiral wave which is…

Chaotic Dynamics · Physics 2015-05-30 Yuting Li , Haihong Li , Yun Zhu , Mei Zhang , Junzhong Yang

Self-propelled phoretic colloids have recently emerged as a promising avenue for the design of artificial swimmers. These swimmers combine purely phoretic interactions with intricate hydrodynamics which critically depend on the swimmer…

Soft Condensed Matter · Physics 2018-01-17 Martin Wagner , Marisol Ripoll

When an ensemble of particles interact hydrodynamically, they generically display large-scale transient structures such as swirls in sedimenting particles [1], or colloidal strings in sheared suspensions [2]. Understanding these…

Soft Condensed Matter · Physics 2013-01-24 Nicolas Desreumaux , Jean-Baptiste Caussin , Raphael Jeanneret , Eric Lauga , Denis Bartolo