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Automatically selecting the best performing algorithm for a given dataset or ranking multiple algorithms by their expected performance supports users in developing new machine learning applications. Most approaches for this problem rely on…
Dynamic feature selection (DFS) addresses budget constraints in decision-making by sequentially acquiring features for each instance, making it appealing for resource-limited scenarios. However, existing DFS methods require models…
Time series anomaly detection strives to uncover potential abnormal behaviors and patterns from temporal data, and has fundamental significance in diverse application scenarios. Constructing an effective detection model usually requires…
Knowledge extraction from database is the fundamental task in database and data mining community, which has been applied to a wide range of real-world applications and situations. Different from the support-based mining models, the…
In this paper, we present and prove some consistency results about the performance of classification models using a subset of features. In addition, we propose to use beam search to perform feature selection, which can be viewed as a…
Time series analysis has become crucial in various fields, from engineering and finance to healthcare and social sciences. Due to their multidimensional nature, time series often need to be embedded into a fixed-dimensional feature space to…
The goal of constraint-based sequence mining is to find sequences of symbols that are included in a large number of input sequences and that satisfy some constraints specified by the user. Many constraints have been proposed in the…
Machine learning algorithms are designed to capture complex relationships between features. In this context, the high dimensionality of data often results in poor model performance, with the risk of overfitting. Feature selection, the…
Irregular Multivariate Time Series (IMTS) are characterized by uneven intervals between consecutive timestamps, which carry sampling pattern information valuable and informative for learning temporal and variable dependencies. In addition,…
The task of clustering unlabeled time series and sequences entails a particular set of challenges, namely to adequately model temporal relations and variable sequence lengths. If these challenges are not properly handled, the resulting…
Table Retrieval (TR) has traditionally been formulated as an ad-hoc retrieval problem, where relevance is primarily determined by topical semantic similarity. With the growing adoption of LLM-based agentic systems, access to structured data…
Biclustering is an unsupervised data mining technique that aims to unveil patterns (biclusters) from gene expression data matrices. In the framework of this thesis, we propose new biclustering algorithms for microarray data. The latter is…
Understanding the structure and dynamics of biological networks is one of the important challenges in system biology. In addition, increasing amount of experimental data in biological networks necessitate the use of efficient methods to…
Semantic segmentation models have two fundamental weaknesses: i) they require large training sets with costly pixel-level annotations, and ii) they have a static output space, constrained to the classes of the training set. Toward…
Although deep networks have been widely adopted, one of their shortcomings has been their blackbox nature. One particularly difficult problem in machine learning is multivariate time series (MVTS) classification. MVTS data arise in many…
An important problem in bioinformatics is the inference of gene regulatory networks (GRN) from temporal expression profiles. In general, the main limitations faced by GRN inference methods is the small number of samples with huge…
Data-centric AI encourages the need of cleaning and understanding of data in order to achieve trustworthy AI. Existing technologies, such as AutoML, make it easier to design and train models automatically, but there is a lack of a similar…
Extraordinary amounts of data are being produced in many branches of science. Proven statistical methods are no longer applicable with extraordinary large data sets due to computational limitations. A critical step in big data analysis is…
In order to allow machine learning algorithms to extract knowledge from raw data, these data must first be cleaned, transformed, and put into machine-appropriate form. These often very time-consuming phase is referred to as preprocessing.…
A general Bayesian framework for model selection on random network models regarding their features is considered. The goal is to develop a principle Bayesian model selection approach to compare different fittable, not necessarily nested,…