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We study dynamic graph algorithms in the Massively Parallel Computation model, which was inspired by practical data processing systems. Our goal is to provide algorithms that can efficiently handle large batches of edge insertions and…

Data Structures and Algorithms · Computer Science 2021-01-12 Krzysztof Nowicki , Krzysztof Onak

Graph is a useful data structure to model various real life aspects like email communications, co-authorship among researchers, interactions among chemical compounds, and so on. Supporting such real life interactions produce a knowledge…

Data Structures and Algorithms · Computer Science 2016-11-11 Kifayat Ullah Khan , Waqas Nawaz , Young-Koo Lee

Control parallelism and data parallelism is mostly reasoned and optimized as separate functions. Because of this, workloads that are irregular, fine-grain and dynamic such as dynamic graph processing become very hard to scale. An…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-03-08 Bibrak Qamar Chandio , Thomas Sterling , Prateek Srivastava

The problem of accurately measuring the similarity between graphs is at the core of many applications in a variety of disciplines. Graph kernels have recently emerged as a promising approach to this problem. There are now many kernels, each…

This paper proposes a compression framework for adjacency matrices of weighted graphs based on graph filter banks. Adjacency matrices are widely used mathematical representations of graphs and are used in various applications in signal…

Signal Processing · Electrical Eng. & Systems 2024-02-06 Kenta Yanagiya , Junya Hara , Hiroshi Higashi , Yuichi Tanaka , Antonio Ortega

In recent years, kernel methods are widespread in tasks of similarity measuring. Specifically, graph kernels are widely used in fields of bioinformatics, chemistry and financial data analysis. However, existing methods, especially entropy…

Machine Learning · Computer Science 2023-03-27 Chengyu Sun , Xing Ai , Zhihong Zhang , Edwin R Hancock

In the last few decades, research techniques have improved lossless compression ratios by significantly increasing processing time. However, these techniques have not gained popularity in industry because production systems require high…

Graph sparsification is a technique that approximates a given graph by a sparse graph with a subset of vertices and/or edges. The goal of an effective sparsification algorithm is to maintain specific graph properties relevant to the…

Databases · Computer Science 2023-11-22 Yuhan Chen , Haojie Ye , Sanketh Vedula , Alex Bronstein , Ronald Dreslinski , Trevor Mudge , Nishil Talati

Large Language Models (LLMs) have demonstrated remarkable capabilities in modeling sequential textual data and generalizing across diverse tasks. However, adapting LLMs to effectively handle structural data, such as knowledge graphs or web…

Computation and Language · Computer Science 2025-11-12 Jiarui Feng , Donghong Cai , Yixin Chen , Muhan Zhang

The problem of finding dense components of a graph is a widely explored area in data analysis, with diverse applications in fields and branches of study including community mining, spam detection, computer security and bioinformatics. This…

Information Retrieval · Computer Science 2021-03-02 B. D. M. De Zoysa , Y. A. M. M. A. Ali , M. D. I. Maduranga , Indika Perera , Saliya Ekanayake , Anil Vullikanti

Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action…

Machine Learning · Computer Science 2021-01-06 Haoyan Xu , Ziheng Duan , Jie Feng , Runjian Chen , Qianru Zhang , Zhongbin Xu , Yueyang Wang

Representing patterns as labeled graphs is becoming increasingly common in the broad field of computational intelligence. Accordingly, a wide repertoire of pattern recognition tools, such as classifiers and knowledge discovery procedures,…

Computer Vision and Pattern Recognition · Computer Science 2017-05-11 Lorenzo Livi

Graph algorithms and techniques are increasingly being used in scientific and commercial applications to express relations and explore large data sets. Although conventional or commodity computer architectures, like CPU or GPU, can compute…

Hardware Architecture · Computer Science 2017-07-03 Michel A. Kinsy , Rashmi S. Agrawal , Hien D. Nguyen

Real-world graphs are massive in size and we need a huge amount of space to store them. Graph compression allows us to compress a graph so that we need a lesser number of bits per link to store it. Of many techniques to compress a graph, a…

Social and Information Networks · Computer Science 2021-05-13 Muhammad Irfan Yousuf , Izza Anwer , Muhammad Abid

The simulation of the physical movement of multi-body systems at an atomistic level, with forces calculated from a quantum mechanical description of the electrons, motivates a graph partitioning problem studied in this article. Several…

Motivated by the prevalent data science applications of processing large-scale graph data such as social networks and biological networks, this paper investigates lossless compression of data in the form of a labeled graph. Particularly, we…

Information Theory · Computer Science 2024-05-24 Alankrita Bhatt , Ziao Wang , Chi Wang , Lele Wang

With the rapid growth of unstructured and semistructured data, parallelizing graph algorithms has become essential for efficiency. However, due to the inherent irregularity in computation, memory access patterns, and communication, graph…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-16 Nibedita Behera , Ashwina Kumar , Atharva Chougule , Mohammed Shan P S , Rushabh Nirdosh Lalwani , Rupesh Nasre

Graph embedding aims at learning a vector-based representation of vertices that incorporates the structure of the graph. This representation then enables inference of graph properties. Existing graph embedding techniques, however, do not…

Graph kernels are often used in bioinformatics and network applications to measure the similarity between graphs; therefore, they may be used to construct efficient graph classifiers. Many graph kernels have been developed thus far, but to…

Quantum Physics · Physics 2022-11-01 Kaito Kishi , Takahiko Satoh , Rudy Raymond , Naoki Yamamoto , Yasubumi Sakakibara

Maintaining a $k$-core decomposition quickly in a dynamic graph has important applications in network analysis. The main challenge for designing efficient exact algorithms is that a single update to the graph can cause significant global…

Data Structures and Algorithms · Computer Science 2023-09-28 Quanquan C. Liu , Jessica Shi , Shangdi Yu , Laxman Dhulipala , Julian Shun