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This paper proposes Scalene, a profiler specialized for Python. Scalene combines a suite of innovations to precisely and simultaneously profile CPU, memory, and GPU usage, all with low overhead. Scalene's CPU and memory profilers help…

Programming Languages · Computer Science 2023-03-24 Emery D. Berger , Sam Stern , Juan Altmayer Pizzorno

This paper presents catsim, the first package written in the Python language specialized in computerized adaptive tests and the logistical models of Item Response Theory. catsim provides functions for generating item and examinee…

Applications · Statistics 2018-07-23 Douglas De Rizzo Meneghetti , Plinio Thomaz Aquino Junior

Deep learning has enabled major advances in the fields of computer vision, natural language processing, and multimedia among many others. Developing a deep learning system is arduous and complex, as it involves constructing neural network…

Machine Learning · Computer Science 2017-08-04 Hao Dong , Akara Supratak , Luo Mai , Fangde Liu , Axel Oehmichen , Simiao Yu , Yike Guo

This article introduces 'cpp11armadillo', a new R package that integrates the powerful Armadillo C++ library for linear algebra into the R programming environment. Targeted primarily at social scientists and other non-programmers, this…

Mathematical Software · Computer Science 2025-02-25 Mauricio Vargas Sepúlveda , Jonathan Schneider Malamud

We present Simphony, a free and open-source software toolbox for abstracting and simulating photonic integrated circuits, implemented in Python. The toolbox is both fast and easily extensible; plugins can be written to provide compatibility…

Emerging Technologies · Computer Science 2020-09-14 Sequoia Ploeg , Hyrum Gunther , Ryan M. Camacho

Autonomic computing has been proposed recently as a way to address the difficult management of applications whose complexity is constantly increasing. Autonomous applications will have to be especially flexible and be able to monitor…

Networking and Internet Architecture · Computer Science 2009-09-29 Simon Patarin , Mesaac Makpangou

It is nearly twenty years that there exist computer programs to reduce products of Lie algebra irreps. This is a contribution in the field that uses a modern computer language (``C'') in a highly structured and object-oriented way. This…

High Energy Physics - Theory · Physics 2009-10-28 A. Candiello

This paper introduces the first, open source software library for Constraint Consistent Learning (CCL). It implements a family of data-driven methods that are capable of (i) learning state-independent and -dependent constraints, (ii)…

Robotics · Computer Science 2020-02-19 Yuchen Zhao , Jeevan Manavalan , Prabhakar Ray , Hsiu-Chin Lin , Matthew Howard

Spectral line observations are an indispensable tool to remotely probe the physical and chemical conditions throughout the universe. Modelling their behaviour is a computational challenge that requires dedicated software. In this paper, we…

Instrumentation and Methods for Astrophysics · Physics 2024-11-06 Thomas Ceulemans , Frederik De Ceuster , Leen Decin , Jeremy Yates

Despite impressive success of machine learning algorithms in clinical natural language processing (cNLP), rule-based approaches still have a prominent role. In this paper, we introduce medspaCy, an extensible, open-source cNLP library based…

Computation and Language · Computer Science 2021-06-16 Hannah Eyre , Alec B Chapman , Kelly S Peterson , Jianlin Shi , Patrick R Alba , Makoto M Jones , Tamara L Box , Scott L DuVall , Olga V Patterson

collapse is a large C/C++-based infrastructure package facilitating complex statistical computing, data transformation, and exploration tasks in R - at outstanding levels of performance and memory efficiency. It also implements a…

Computation · Statistics 2025-06-02 Sebastian Krantz

Queueing networks and Markov chains are widely used for conducting performance and reliability studies. In this paper we describe the queueing package, a free software package for queueing networks and Markov chain analysis for GNU Octave.…

Performance · Computer Science 2022-09-12 Moreno Marzolla

In this paper we introduce DISROPT, a Python package for distributed optimization over networks. We focus on cooperative set-ups in which an optimization problem must be solved by peer-to-peer processors (without central coordinators) that…

Optimization and Control · Mathematics 2021-04-21 Francesco Farina , Andrea Camisa , Andrea Testa , Ivano Notarnicola , Giuseppe Notarstefano

We present an overview of Sherpa, an open source Python project, and discuss its development history, broad design concepts and capabilities. Sherpa contains powerful tools for combining parametric models into complex expressions that can…

CybORG++ is an advanced toolkit for reinforcement learning research focused on network defence. Building on the CAGE 2 CybORG environment, it introduces key improvements, including enhanced debugging capabilities, refined agent…

Cryptography and Security · Computer Science 2024-10-23 Harry Emerson , Liz Bates , Chris Hicks , Vasilios Mavroudis

Computer simulation has become one of the most important tools in scientific research in many disciplines. Benefiting from the dynamical trajectories regulated by versatile interatomic interactions, various material properties can be…

Materials Science · Physics 2024-11-28 Y. -C. Hu , J. Tian

Understanding how the brain functions is one of the biggest challenges of our time. The analysis of experimentally recorded neural firing patterns (spike trains) plays a crucial role in addressing this problem. Here, the PySpike library is…

Data Analysis, Statistics and Probability · Physics 2016-07-12 Mario Mulansky , Thomas Kreuz

STANSE is a free (available under the GPLv2 license) modular framework for finding bugs in C programs using static analysis. Its two main design goals are 1) ability to process large software projects like the Linux kernel and 2)…

Software Engineering · Computer Science 2012-02-06 Jan Obdržálek , Jiří Slabý , Marek Trtík

Scientific advancement relies on the ability to share and reproduce results. When data analysis or calculations are carried out using software written by scientists there are special challenges around code versions, quality and code…

Software Engineering · Computer Science 2025-07-09 S. Lee , C. Myers , A. Yang , T. Zhang , S. J. L. Billinge

This paper presents the design and implementation of Juniper: a functional reactive programming language (FRP) targeting the Arduino and related microcontroller systems. Juniper provides a number of high level features, including parametric…

Programming Languages · Computer Science 2019-12-02 Caleb Helbling , Samuel Z Guyer
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