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Visual localization is the task of accurate camera pose estimation in a known scene. It is a key problem in computer vision and robotics, with applications including self-driving cars, Structure-from-Motion, SLAM, and Mixed Reality.…

Computer Vision and Pattern Recognition · Computer Science 2019-03-19 Torsten Sattler , Qunjie Zhou , Marc Pollefeys , Laura Leal-Taixe

We study end-to-end learning strategies for 3D shape inference from images, in particular from a single image. Several approaches in this direction have been investigated that explore different shape representations and suitable learning…

Computer Vision and Pattern Recognition · Computer Science 2019-08-21 Roman Klokov , Jakob Verbeek , Edmond Boyer

Application of the minimum distance method to the linear regression model for estimating regression parameters is a difficult and time-consuming process due to the complexity of its distance function, and hence, it is computationally…

Computation · Statistics 2017-02-15 Jiwoong Kim

The past decade has witnessed the development and success of coarse-grained network models of proteins for predicting many equilibrium properties related to collective modes of motion. Curiously, the results are usually robust towards the…

Biomolecules · Quantitative Biology 2010-02-04 Canan Atilgan , Osman Burak Okan , Ali Rana Atilgan

A complete time-parameterized statistical model quantifying the divergent evolution of protein structures in terms of the patterns of conservation of their secondary structures is inferred from a large collection of protein 3D structure…

Quantitative Methods · Quantitative Biology 2023-08-15 Sandun Rajapaksa , Lloyd Allison , Peter J. Stuckey , Maria Garcia de la Banda , Arun S. Konagurthu

The worldwide surge of multiresistant microbial strains has propelled the search for alternative treatment options. The study of Protein-Protein Interactions (PPIs) has been a cornerstone in the clarification of complex physiological and…

In this paper we experiment with using neural network structures to predict a protein's secondary structure ({\alpha} helix positions) from only its primary structure (amino acid sequence). We implement a fully connected neural network…

Machine Learning · Computer Science 2022-08-25 Sidharth Malhotra , Robin Walters

Recovering images from undersampled linear measurements typically leads to an ill-posed linear inverse problem, that asks for proper statistical priors. Building effective priors is however challenged by the low train and test overhead…

Artificial Intelligence · Computer Science 2017-11-29 Morteza Mardani , Hatef Monajemi , Vardan Papyan , Shreyas Vasanawala , David Donoho , John Pauly

In this paper we give a survey of methods used to calculate values of resistance distance (also known as effective resistance) in graphs. Resistance distance has played a prominent role not only in circuit theory and chemistry, but also in…

Combinatorics · Mathematics 2021-09-15 E. J. Evans , A. E. Francis

Head poses are a key component of human bodily communication and thus a decisive element of human-computer interaction. Real-time head pose estimation is crucial in the context of human-robot interaction or driver assistance systems. The…

Computer Vision and Pattern Recognition · Computer Science 2019-08-02 Ines Rieger , Thomas Hauenstein , Sebastian Hettenkofer , Jens-Uwe Garbas

The ResNet architecture has been widely adopted in deep learning due to its significant boost to performance through the use of simple skip connections, yet the underlying mechanisms leading to its success remain largely unknown. In this…

Machine Learning · Computer Science 2024-01-18 Jianing Li , Vardan Papyan

Deep learning approaches achieved significant progress in predicting protein structures. These methods are often applied to protein-protein interactions (PPIs) yet require Multiple Sequence Alignment (MSA) which is unavailable for various…

Machine Learning · Computer Science 2024-06-27 Matan Halfon , Tomer Cohen , Raanan Fattal , Dina Schneidman-Duhovny

The analysis of correlations of amino acid occurrences in globular proteins has led to the development of statistical tools that can identify native contacts -- portions of the chains that come to close distance in folded structural…

Biomolecules · Quantitative Biology 2014-07-28 Rocío Espada , R. Gonzalo Parra , Thierry Mora , Aleksandra M. Walczak , Diego Ferreiro

Grasping objects is one of the most important abilities that a robot needs to master in order to interact with its environment. Current state-of-the-art methods rely on deep neural networks trained to jointly predict a graspability score…

Robotics · Computer Science 2021-04-01 Amaury Depierre , Emmanuel Dellandréa , Liming Chen

Close human-robot cooperation is a key enabler for new developments in advanced manufacturing and assistive applications. Close cooperation require robots that can predict human actions and intent, and understand human non-verbal cues.…

Human-Computer Interaction · Computer Science 2019-02-19 Paul Schydlo , Mirko Rakovic , Lorenzo Jamone , José Santos-Victor

An effective potential function is critical for protein structure prediction and folding simulation. For simplified models of proteins where coordinates of only $C_\alpha$ atoms need to be specified, an accurate potential function is…

Biomolecules · Quantitative Biology 2016-11-17 Jinfeng Zhang , Rong Chen , Jie Liang

Protein tertiary structure defines its functions, classification and binding sites. Similar structural characteristics between two proteins often lead to the similar characteristics thereof. Determining structural similarity accurately in…

Computer Vision and Pattern Recognition · Computer Science 2016-10-05 Rezaul Karim , Md. Momin Al Aziz , Swakkhar Shatabda , M. Sohel Rahman

Protein structure prediction remains to be an open problem in bioinformatics. There are two main categories of methods for protein structure prediction: Free Modeling (FM) and Template Based Modeling (TBM). Protein threading, belonging to…

Biomolecules · Quantitative Biology 2015-09-14 Haicang Zhang , Mingfu Shao , Chao Wang , Jianwei Zhu , Wei-Mou Zheng , Dongbo Bu

Coordinate transformation models often fail to account for nonlinear and spatially dependent distortions, leading to significant residual errors in geospatial applications. Here we propose a residual-based neural correction strategy, in…

Deep neural networks demonstrate to have a high performance on image classification tasks while being more difficult to train. Due to the complexity and vanishing gradient problem, it normally takes a lot of time and more computational…

Computer Vision and Pattern Recognition · Computer Science 2018-05-02 Mohammad Sadegh Ebrahimi , Hossein Karkeh Abadi
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