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The development of Multimodal Virtual Agents has made significant progress through the integration of Multimodal Large Language Models. However, mainstream training paradigms face key challenges: Behavior Cloning is simple and effective…

Machine Learning · Computer Science 2026-01-06 Keyu Wang , Bingchen Miao , Wendong Bu , Yu Wu , Juncheng Li , Shengyu Zhang , Wenqiao Zhang , Siliang Tang , Jun Xiao , Yueting Zhuang

The idea of using deep-learning-based molecular generation to accelerate discovery of drug candidates has attracted extraordinary attention, and many deep generative models have been developed for automated drug design, termed molecular…

Biomolecules · Quantitative Biology 2024-05-01 Odin Zhang , Haitao Lin , Hui Zhang , Huifeng Zhao , Yufei Huang , Yuansheng Huang , Dejun Jiang , Chang-yu Hsieh , Peichen Pan , Tingjun Hou

Large language models (LLMs) often solve challenging math exercises yet fail to apply the concept right when the problem requires genuine understanding. Popular Reinforcement Learning with Verifiable Rewards (RLVR) pipelines reinforce final…

Artificial Intelligence · Computer Science 2026-05-08 Zijun Gao , Zhikun Xu , Xiao Ye , Ben Zhou

In the past decade, Artificial Intelligence driven drug design and discovery has been a hot research topic, where an important branch is molecule generation by generative models, from GAN-based models and VAE-based models to the latest…

Biomolecules · Quantitative Biology 2023-10-10 Siyuan Guo , Jihong Guan , Shuigeng Zhou

It is common to view programs as a combination of logic and control: the logic part defines what the program must do, the control part -- how to do it. The Logic Programming paradigm was developed with the intention of separating the logic…

Artificial Intelligence · Computer Science 2011-05-30 O. Ledeniov , S. Markovitch

Link prediction (LP) is a fundamental task in graph representation learning, with numerous applications in diverse domains. However, the generalizability of LP models is often compromised due to the presence of noisy or spurious information…

Machine Learning · Computer Science 2024-04-18 Kaiwen Dong , Zhichun Guo , Nitesh V. Chawla

Conditional molecular optimization aims to edit a molecule to realize a specified property shift. In practice, structurally similar molecule data is scarce, while decisions are inherently action-level: at each step, the system must select…

Artificial Intelligence · Computer Science 2026-05-12 Haojie Rao , Kun Li , Yida Xiong , Jiameng Chen , Wenbin Hu , Yizhen Zheng , Jiajun Yu , Duanhua Cao

Molecular optimization is a key challenge in drug discovery and material science domain, involving the design of molecules with desired properties. Existing methods focus predominantly on single-property optimization, necessitating…

Machine Learning · Computer Science 2024-09-13 Aye Phyu Phyu Aung , Jay Chaudhary , Ji Wei Yoon , Senthilnath Jayavelu

Deep learning based molecular graph generation and optimization has recently been attracting attention due to its great potential for de novo drug design. On the one hand, recent models are able to efficiently learn a given graph…

Chemical Physics · Physics 2021-06-28 Rémy Brossard , Oriel Frigo , David Dehaene

Machine learning based methods have shown potential for optimizing existing molecules with more desirable properties, a critical step towards accelerating new chemical discovery. Here we propose QMO, a generic query-based molecule…

Machine Learning · Computer Science 2022-04-21 Samuel Hoffman , Vijil Chenthamarakshan , Kahini Wadhawan , Pin-Yu Chen , Payel Das

We develop algorithms for inner approximating the cone of positive semidefinite matrices via linear programming and second order cone programming. Starting with an initial linear algebraic approximation suggested recently by Ahmadi and…

Optimization and Control · Mathematics 2016-03-14 Amir Ali Ahmadi , Sanjeeb Dash , Georgina Hall

Using generative deep learning models and reinforcement learning together can effectively generate new molecules with desired properties. By employing a multi-objective scoring function, thousands of high-scoring molecules can be generated,…

Molecular dynamics simulations provide theoretical insight into the microscopic behavior of materials in condensed phase and, as a predictive tool, enable computational design of new compounds. However, because of the large temporal and…

Chemical Physics · Physics 2020-06-18 Wujie Wang , Rafael Gómez-Bombarelli

Molecule optimization is an important problem in chemical discovery and has been approached using many techniques, including generative modeling, reinforcement learning, genetic algorithms, and much more. Recent work has also applied…

Biomolecules · Quantitative Biology 2022-10-31 Elvin Lo , Pin-Yu Chen

Multimodal Large Language Models have demonstrated remarkable capabilities in video understanding, yet face prohibitive computational costs and performance degradation from ''context rot'' due to massive visual token redundancy. Existing…

Computer Vision and Pattern Recognition · Computer Science 2026-03-30 Shida Wang , YongXiang Hua , Zhou Tao , Haoyu Cao , Linli Xu

Code review is a common process that is used by developers, in which a reviewer provides useful comments or points out defects in the submitted source code changes via pull request. Code review has been widely used for both industry and…

Software Engineering · Computer Science 2019-12-23 JingKai Siow , Cuiyun Gao , Lingling Fan , Sen Chen , Yang Liu

The way customers search for and choose products is changing with the rise of large language models (LLMs). LLM-based search, or generative engines, provides direct product recommendations to users, rather than traditional online search…

Computation and Language · Computer Science 2026-02-04 Haibo Jin , Ruoxi Chen , Peiyan Zhang , Yifeng Luo , Huimin Zeng , Man Luo , Haohan Wang

Topology Optimization seeks to find the best design that satisfies a set of constraints while maximizing system performance. Traditional iterative optimization methods like SIMP can be computationally expensive and get stuck in local…

Machine Learning · Computer Science 2023-03-20 Giorgio Giannone , Faez Ahmed

Recent advances in language models have enabled framing molecule generation as sequence modeling. However, existing approaches often rely on single-objective reinforcement learning, limiting their applicability to real-world drug design,…

Machine Learning · Computer Science 2025-02-11 Diego Calanzone , Pierluca D'Oro , Pierre-Luc Bacon

Making text-to-image (T2I) generative model sample both fast and well represents a promising research direction. Previous studies have typically focused on either enhancing the visual quality of synthesized images at the expense of sampling…

Computer Vision and Pattern Recognition · Computer Science 2025-03-14 Shitong Shao , Zikai Zhou , Dian Xie , Yuetong Fang , Tian Ye , Lichen Bai , Zeke Xie