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Scientific open-source software (Sci-OSS) projects are critical for advancing research, yet sustaining these projects long-term remains a major challenge. This paper explores the sustainability of Sci-OSS hosted on GitHub, focusing on two…

Software Engineering · Computer Science 2025-11-12 Sharif Ahmed , Addi Malviya Thakur , Gregory R. Watson , Nasir U. Eisty

Translating software between programming languages is a challenging task, for which automated techniques have been elusive and hard to scale up to larger programs. A key difficulty in cross-language translation is that one has to re-express…

Programming Languages · Computer Science 2025-09-16 Bo Wang , Tianyu Li , Ruishi Li , Umang Mathur , Prateek Saxena

Developing software to undertake complex, compute-intensive scientific processes requires a challenging combination of both specialist domain knowledge and software development skills to convert this knowledge into efficient code. As…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-09-05 Jeremy Cohen , Chris Cantwell , Neil Chue Hong , David Moxey , Malcolm Illingworth , Andrew Turner , John Darlington , Spencer Sherwin

We are research software engineers and team members in the Department of Software Engineering and Research at Sandia National Laboratories, an organization which aims to advance software engineering in the domain of computational science.…

Software Engineering · Computer Science 2020-10-16 Miranda Mundt , Evan Harvey

Software is a critical aspect of large-scale science, providing essential capabilities for making scientific discoveries. Large-scale scientific projects are vast in scope, with lifespans measured in decades and costs exceeding hundreds of…

Instrumentation and Methods for Astrophysics · Physics 2023-05-15 Neil A. Ernst , John Klein , Marco Bartolini , Jeremy Coles , Nick Rees

Despite the importance of scientific software for research, it is often not formally recognized and rewarded. This is especially true for foundational libraries, which are hidden below packages visible to the users (and thus doubly hidden,…

Systems Engineering (SE) is the set of processes and documentation required for successfully realising large-scale engineering projects, but the classical approach is not a good fit for software-intensive projects, especially when the needs…

Instrumentation and Methods for Astrophysics · Physics 2017-12-05 Juande Santander-Vela

Extreme-scale computational science increasingly demands multiscale and multiphysics formulations. Combining software developed by independent groups is imperative: no single team has resources for all predictive science and decision…

Software is the key crosscutting technology that enables advances in mathematics, computer science, and domain-specific science and engineering to achieve robust simulations and analysis for science, engineering, and other research fields.…

The communities who develop and support open source scientific software packages are crucial to the utility and success of such packages. Moreover, these communities form an important part of the human infrastructure that enables scientific…

Context: Scientific software plays an important role in critical decision making, for example making weather predictions based on climate models, and computation of evidence for research publications. Recently, scientists have had to…

Software Engineering · Computer Science 2018-04-06 Upulee Kanewala , James M. Bieman

Programming is ubiquitous in applied biostatistics; adopting software engineering skills will help biostatisticians do a better job. To explain this, we start by highlighting key challenges for software development and application in…

Although computer science papers are often accompanied by software artifacts, connecting research papers to their software artifacts and vice versa is not always trivial. First of all, there is a lack of well-accepted standards for how such…

Software Engineering · Computer Science 2021-04-14 Hideaki Hata , Jin L. C. Guo , Raula Gaikovina Kula , Christoph Treude

Many science advances have been possible thanks to the use of research software, which has become essential to advancing virtually every Science, Technology, Engineering and Mathematics (STEM) discipline and many non-STEM disciplines…

Software Engineering · Computer Science 2019-02-26 Daniel S. Katz , Patrick Aerts , Neil P. Chue Hong , Anshu Dubey , Sandra Gesing , Henry J. Neeman , David E. Pearah

Background: Research software plays an important role in solving real-life problems, empowering scientific innovations, and handling emergency situations. Therefore, the correctness and trustworthiness of research software are of absolute…

Software Engineering · Computer Science 2022-07-27 Nasir U. Eisty , Jeffrey C. Carver

Background: The development of scientific software applications is far from trivial, due to the constant increase in the necessary complexity of these applications, their increasing size, and their need for intensive maintenance and reuse.…

Software Engineering · Computer Science 2020-10-21 Elvira-Maria Arvanitou , Apostolos Ampatzoglou , Alexander Chatzigeorgiou , Jeffrey C. Carver

Modern science is relying on software more than ever. The behavior and outcomes of this software shape the scientific and public discourse on important topics like climate change, economic growth, or the spread of infections. Most…

Software Engineering · Computer Science 2025-01-09 Adrian Bajraktari , Michelle Binder , Andreas Vogelsang

Computational science relies on scientific software as its primary instrument for scientific discovery. Therefore, similar to the use of other types of scientific instruments, correct software and the correct operation of the software is…

Software Engineering · Computer Science 2024-05-20 Akash Dhruv , Rajeev Jain , Jared O'Neal , Klaus Weide , Anshu Dubey

Open Science aims to foster openness and collaboration in research, leading to more significant scientific and social impact. However, practicing Open Science comes with several challenges and is currently not properly rewarded. In this…

Software Engineering · Computer Science 2024-05-21 Edson OliveiraJr , Fernanda Madeiral , Alcemir Rodrigues Santos , Christina von Flach , Sergio Soares

Many scientific-software projects test their codes inadequately, or not at all. Despite its well-known benefits, adopting routine testing is often not easy. Development teams may have doubts about establishing effective test procedures,…

Software Engineering · Computer Science 2014-11-11 Paul Madden , Eduardo G. Valente