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In the past decade, tracking health trends using social media data has shown great promise, due to a powerful combination of massive adoption of social media around the world, and increasingly potent hardware and software that enables us to…

Computers and Society · Computer Science 2018-05-16 Martin Mueller , Marcel Salathé

A large number of computational scientific research projects make use of open source software packages. However, the development process of such tools frequently differs from conventional software development; partly because of the nature…

Software Engineering · Computer Science 2013-09-24 Ivan Girotto , Axel Kohlmeyer , David Grellscheid , Shawn T. Brown

Learning medical visual representations from image-report pairs through joint learning has garnered increasing research attention due to its potential to alleviate the data scarcity problem in the medical domain. The primary challenges stem…

Computer Vision and Pattern Recognition · Computer Science 2025-12-09 Jun Wang , Lixing Zhu , Xiaohan Yu , Abhir Bhalerao , Yulan He

The process of manually searching for relevant instances in, and extracting information from, clinical databases underpin a multitude of clinical tasks. Such tasks include disease diagnosis, clinical trial recruitment, and continuing…

Signal Processing · Electrical Eng. & Systems 2021-10-05 Dani Kiyasseh , Tingting Zhu , David A. Clifton

Many signal processing algorithms break the target signal into overlapping segments (also called windows, or patches), process them separately, and then stitch them back into place to produce a unified output. At the overlaps, the final…

Signal Processing · Electrical Eng. & Systems 2021-03-15 Ignacio Francisco Ramírez Paulino

Deep Learning has shown great success in reshaping medical imaging, yet it faces numerous challenges hindering widespread application. Issues like catastrophic forgetting and distribution shifts in the continuously evolving data stream…

Computer Vision and Pattern Recognition · Computer Science 2024-10-02 Mohammad Areeb Qazi , Anees Ur Rehman Hashmi , Santosh Sanjeev , Ibrahim Almakky , Numan Saeed , Camila Gonzalez , Mohammad Yaqub

Recent progress in diffusion models significantly advances various image generation tasks. However, the current mainstream approach remains focused on building task-specific models, which have limited efficiency when supporting a wide range…

Computer Vision and Pattern Recognition · Computer Science 2026-01-08 Zhong-Yu Li , Ruoyi Du , Juncheng Yan , Le Zhuo , Qilong Wu , Zhen Li , Peng Gao , Zhanyu Ma , Ming-Ming Cheng

Extracting medical knowledge from healthcare texts enhances downstream tasks like medical knowledge graph construction and clinical decision-making. However, the construction and application of knowledge extraction models lack automation,…

Artificial Intelligence · Computer Science 2023-10-05 Hongxin Ding , Peinie Zou , Zhiyuan Wang , Junfeng Zhao , Yasha Wang , Qiang Zhou

Decades' advances in digital health technologies, such as electronic health records, have largely streamlined routine clinical processes. Yet, most these systems are still hard to learn and use: Clinicians often face the burden of managing…

Artificial Intelligence · Computer Science 2025-09-16 Jared Zhu , Junde Wu

Accurately predicting the upgrade of ductal carcinoma in situ (DCIS) to invasive ductal carcinoma (IDC) is crucial for surgical planning. However, traditional deep learning methods face challenges due to limited ultrasound data and poor…

Computer Vision and Pattern Recognition · Computer Science 2026-01-06 Tao Li , Qing Li , Na Li , Hui Xie

ivadomed is an open-source Python package for designing, end-to-end training, and evaluating deep learning models applied to medical imaging data. The package includes APIs, command-line tools, documentation, and tutorials. ivadomed also…

Image and Video Processing · Electrical Eng. & Systems 2020-10-26 Charley Gros , Andreanne Lemay , Olivier Vincent , Lucas Rouhier , Anthime Bucquet , Joseph Paul Cohen , Julien Cohen-Adad

The integration of Large Language Models (LLMs) into healthcare promises to transform medical diagnostics, research, and patient care. Yet, the progression of medical LLMs faces obstacles such as complex training requirements, rigorous…

Machine Learning · Computer Science 2024-04-26 Emre Can Acikgoz , Osman Batur İnce , Rayene Bench , Arda Anıl Boz , İlker Kesen , Aykut Erdem , Erkut Erdem

There exist numerous diagnostic tasks in pathology. Conventional computational pathology formulates and tackles them as independent and individual image classification problems, thereby resulting in computational inefficiency and high…

Image and Video Processing · Electrical Eng. & Systems 2024-07-15 Anh Tien Nguyen , Keunho Byeon , Kyungeun Kim , Boram Song , Seoung Wan Chae , Jin Tae Kwak

Computer-assisted surgery (CAS) systems are designed to assist surgeons during procedures, thereby reducing complications and enhancing patient care. Training machine learning models for these systems requires a large corpus of annotated…

Computer Vision and Pattern Recognition · Computer Science 2024-10-14 Danush Kumar Venkatesh , Dominik Rivoir , Micha Pfeiffer , Stefanie Speidel

Most existing approaches to AI in pharmacy collapse three epistemologically distinct operations into a single technical layer: document preservation, semantic interpretation, and contextual presentation. This conflation is a root cause of…

Data is often impractical to share for a range of well considered reasons, such as concerns over privacy, intellectual property, and legal constraints. This not only fragments the statistical power of predictive models, but creates an…

Open Science is a recurrent topic in scientific discussion, and there is a current effort to make research more accessible to a broader audience. A focus on delivering research findings that are reproducible, or even re-usable has been…

Human-Computer Interaction · Computer Science 2024-02-16 Pedro Costa Klein , Christoph Lehrenfeld , Markus Osterhoff , Martin Uecker

Social multimedia users are increasingly sharing all kinds of data about the world. They do this for their own reasons, not to provide data for field studies-but the trend presents a great opportunity for scientists. The Yahoo Flickr…

Conventional machine learning systems that operate on natural images assume the presence of attributes within the images that lead to some decision. However, decisions in medical domain are a resultant of attributes within medical…

Image and Video Processing · Electrical Eng. & Systems 2022-06-28 Yash-yee Logan , Mohit Prabhushankar , Ghassan AlRegib

One-shot medical image segmentation faces fundamental challenges in prototype representation due to limited annotated data and significant anatomical variability across patients. Traditional prototype-based methods rely on deterministic…

Computer Vision and Pattern Recognition · Computer Science 2025-12-23 Ziyuan Gao , Philippe Morel
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