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Motivated by the results of recent laboratory experiments (Yoshida et al. Nature, 424, 303-306 (2003)) as well as many earlier field observations that evolutionary changes can take place in ecosystems over relatively short ecological time…

Populations and Evolution · Quantitative Biology 2007-05-23 Debashish Chowdhury , Dietrich Stauffer

The measurement of the efficiency of an event selection is always an important part of the analysis of experimental data. The statistical techniques which are needed to determine the efficiency and its uncertainty are reviewed. Frequentist…

Data Analysis, Statistics and Probability · Physics 2012-08-28 Diego Casadei

We posit a new paradigm for image information processing. For the last 25 years, this task was usually approached in the frame of Treisman's two-stage paradigm [1]. The latter supposes an unsupervised, bottom-up directed process of…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Emanuel Diamant

Recently we have extended our the "unified" model of evolutionary ecology to incorporate the {\it spatial inhomogeneities} of the eco-system and the {\it migration} of individual organisms from one patch to another within the same…

Populations and Evolution · Quantitative Biology 2009-11-10 Ambarish Kunwar

Predators and their foraging strategies often determine ecosystem structure and function. Yet, the role of protozoan predators in microbial soil ecosystems remains elusive despite the importance of these ecosystems to global biogeochemical…

Populations and Evolution · Quantitative Biology 2023-01-11 Fernando W. Rossine , Gabriel Vercelli , Corina E. Tarnita , Thomas Gregor

This article adopts game theory to build a model for explaining the predation behavior of animals.We assume that both the prey and the preydator have two stratigies in this game,the active one and the passive one.By calculating the outcome…

Populations and Evolution · Quantitative Biology 2007-05-23 Shi Chen , Sheng Bao , Ling Yan , Cheng Huang

Simulations of the coevolution of many interacting species are performed using the Webworld model. The model has a realistic set of predator-prey equations that describe the population dynamics of the species for any structure of the food…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Christopher Quince , Paul G. Higgs , Alan J. McKane

Mobile genetic elements like conjugative plasmids play a crucial role in shaping the genetic content and population dynamics of bacterial species. Bacterial populations often contain not one, but multiple co-circulating MGEs, which modify…

Populations and Evolution · Quantitative Biology 2025-04-25 Berit Siedentop , Jana S. Huisman , Claudia Igler

Monitoring plankton populations in situ is fundamental to preserve the aquatic ecosystem. Plankton microorganisms are in fact susceptible of minor environmental perturbations, that can reflect into consequent morphological and dynamical…

Computer Vision and Pattern Recognition · Computer Science 2022-09-15 Paolo Didier Alfano , Marco Rando , Marco Letizia , Francesca Odone , Lorenzo Rosasco , Vito Paolo Pastore

Causal effect estimation in networked systems is central to data-driven decision making. In such settings, interventions on one unit can spill over to others, and in complex physical or social systems, the interaction pathways driving these…

Machine Learning · Statistics 2025-11-27 Sadegh Shirani , Mohsen Bayati

Plant phenotyping (Guo et al. 2021; Pieruschka et al. 2019) focuses on studying the diverse traits of plants related to the plants' growth. To be more specific, by accurately measuring the plant's anatomical, ontogenetical, physiological…

Machine Learning · Computer Science 2022-01-17 Jun Wu , Elizabeth A. Ainsworth , Sheng Wang , Kaiyu Guan , Jingrui He

We discuss general formation of complementary behaviors, functions and forms in biological species competing for resources. We call orthogonalization the related processes on macro and micro-level of a self-organized formation of…

Biological Physics · Physics 2007-05-23 Petr Kral

Analysis of observational studies increasingly confronts the challenge of determining which of a possibly high-dimensional set of available covariates are required to satisfy the assumption of ignorable treatment assignment for estimation…

Methodology · Statistics 2022-03-23 Chanmin Kim , Mauricio Tec , Corwin M Zigler

Bipartite networks provide an insightful representation of many systems, ranging from mutualistic networks of species interactions to investment networks in finance. The analysis of their topological structures has revealed the ubiquitous…

Physics and Society · Physics 2018-07-20 Mika J. Straka , Guido Caldarelli , Tiziano Squartini , Fabio Saracco

Dispersal is a well recognized driver of ecological and evolutionary dynamics, and simultaneously an evolving trait. Dispersal evolution has traditionally been studied in single-species metapopulations so that it remains unclear how…

Plant-soil feedback is recognized as a causal mechanism for the emergence of vegetation patterns of the same species especially when water is not a limiting resource (e.g. humid environments). Nevertheless, in the field, plants rarely grow…

Populations and Evolution · Quantitative Biology 2026-04-10 Addolorata Marasco , Francesco Giannino , Annalisa Iuorio

We present numerical results based on a simplified ecological system in evolution, showing features of extinction similar to that claimed for the biosystem on Earth. In the model each species consists of a population in interaction with the…

adap-org · Physics 2009-10-28 Guillermo Abramson

Global biodiversity is declining at an unprecedented rate, yet little information is known about most species and how their populations are changing. Indeed, some 90% of Earth's species are estimated to be completely unknown. Machine…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Yuyan Chen , Nico Lang , B. Christian Schmidt , Aditya Jain , Yves Basset , Sara Beery , Maxim Larrivée , David Rolnick

We use optimal control theory with the purpose of finding the best spraying policy with the aim of at least to minimize and possibly to eradicate the number of parasites, i.e., the prey for the spiders living in an agroecosystems. Two…

Optimization and Control · Mathematics 2017-06-01 Cristiana J. Silva , Delfim F. M. Torres , Ezio Venturino

Understanding the architectural subtleties of ecological networks, believed to confer them enhanced stability and robustness, is a subject of outmost relevance. Mutualistic interactions have been profusely studied and their corresponding…

Populations and Evolution · Quantitative Biology 2015-02-19 Virginia Domínguez-García , Miguel A. Muñoz
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