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The solution of a sparse system of linear equations is ubiquitous in scientific applications. Iterative methods, such as the Preconditioned Conjugate Gradient method (PCG), are normally chosen over direct methods due to memory and…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-03-04 Joshua Dennis Booth , Hongyang Sun , Trevor Garnett

Wavefront reconstruction is a critical component in various optical systems, including adaptive optics, interferometry, and phase contrast imaging. Traditional reconstruction methods often employ either the Cartesian (pixel) basis or the…

Optics · Physics 2024-11-06 S. Howard , N. Weisse , J. Schroeder , C. Barbero , B. Alonso , I. Sola , P. Norreys , A. Döpp

Since numbers in the computer are represented with a fixed number of bits, loss of accuracy during calculation is unavoidable. At high precision where more bits (e.g. 64) are allocated to each number, round-off errors are typically small.…

Numerical Analysis · Mathematics 2022-10-11 Yizhou Chen , Xiaoyun Gong , Xiang Ji

We present an efficient scheme for accurate electronic structure interpolations based on the systematically improvable optimized atomic orbitals. The atomic orbitals are generated by minimizing the spillage value between the atomic basis…

Materials Science · Physics 2015-05-20 Mohan Chen , G-C Guo , Lixin He

Our interest lies in the robust and efficient solution of large sparse linear least-squares problems. In recent years, hardware developments have led to a surge in interest in exploiting mixed precision arithmetic within numerical linear…

Numerical Analysis · Mathematics 2025-04-11 Jennifer Scott , Miroslav Tůma

We propose a very simple preprocessing algorithm for semidefinite programming. Our algorithm inspects the constraints of the problem, deletes redundant rows and columns in the constraints, and reduces the size of the variable matrix. It…

Optimization and Control · Mathematics 2016-08-09 Preston Faulk , Gabor Pataki , Quoc Tran-Dinh

In this work we present a new method of approximating the continuum wavefunctions with a discrete basis set. This method aims to be at least compatible with other well known methods of the electronic structure theory to describe processes…

Chemical Physics · Physics 2019-09-18 Mateusz S. Szczygieł , Michał Lesiuk , Robert Moszynski

The global many-electron wave function overlap matrix accounts for all effects beyond the Born-Oppenheimer approximation in the discrete variable local diabatic representation, a numerically exact framework for modeling nonadiabatic conical…

Chemical Physics · Physics 2025-01-10 Yujuan Xie , Bing Gu

Alchemical transformations showed that perturbation theory can be applied also to changes in the atomic nuclear charges of a molecule. The alchemical path that connects two different chemical species involves the conceptualization of a…

Chemical Physics · Physics 2024-03-27 Giorgio Domenichini

We demonstrate how to determine numerically nearly exact orthonormal orbitals that are optimal for evaluation of the energy of arbitrary (correlated) states of atoms and molecules by minimization of the energy Lagrangian. Orbitals are…

We present a novel algorithm which can overcome the drawbacks of the conventional linear scaling method with minimal computational overhead. This is achieved by introducing additional constraints, thus eliminating the redundancy of the…

Materials Science · Physics 2015-06-25 Eiji Tsuchida

Estimation of large sparse covariance matrices is of great importance for statistical analysis, especially in the high-dimensional settings. The traditional approach such as the sample covariance matrix performs poorly due to the high…

Statistics Theory · Mathematics 2023-08-21 Xiaoning Kang , Xinwei Deng

Fixman's work in 1974 and the follow-up studies have developed a method that can factorize the inverse of mass matrix into an arithmetic combination of three sparse matrices---one of them is positive definite and need to be further…

Computational Physics · Physics 2017-09-13 Xiankun Xu , Peiwen Li

In this contribution, we present the implementation of a second-order CASSCF algorithm in conjunction with the Cholesky decomposition of the two-electron repulsion integrals. The algorithm, called Norm-Extended Optimization, guarantees…

Chemical Physics · Physics 2021-04-09 Tommaso Nottoli , Jürgen Gauss , Filippo Lipparini

Quantum phase estimation (QPE) is a promising quantum algorithm for obtaining molecular ground-state energies with chemical accuracy. However, its computational cost, dominated by the Hamiltonian 1-norm $\lambda$ and the cost of the block…

The methods which are actively used for electronic structure calculations of low-lying states of heavy- and superheavy-element compounds are briefly described. The advantages and disadvantages of calculations with the Dirac-Coulomb-Breit…

Chemical Physics · Physics 2009-11-07 A. V. Titov , N. S. Mosyagin , T. A. Isaev , A. N. Petrov

Multiresolution analysis of electronic structure affords the opportunity to capture the full physics of atomic cores in a systematically improvable manner. Applying new techniques, we demonstrate for the first time that multiresolution…

Condensed Matter · Physics 2009-11-07 Torkel D. Engeness , T. A. Arias

In this paper, we introduce a method for approximating the solution to inference and optimization tasks in uncertain and deterministic reasoning. Such tasks are in general intractable for exact algorithms because of the large number of…

Artificial Intelligence · Computer Science 2012-12-12 David Ephraim Larkin

This paper focuses on exploring the sparsity of the inverse covariance matrix $\bSigma^{-1}$, or the precision matrix. We form blocks of parameters based on each off-diagonal band of the Cholesky factor from its modified Cholesky…

Methodology · Statistics 2008-05-27 Clifford Lam

We propose a general method for constructing system-dependent basis functions for correlated quantum chemical calculations. Our construction combines features from several traditional approaches: plane waves, localized basis functions, and…

Chemical Physics · Physics 2018-02-28 Thomas E. Baker , Kieron Burke , Steven R. White
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